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Name : fliP (RSp0375) Accession : NP_521936.1 Strain : Genome accession: NC_003296 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 479811 - 480560 bp Length : 750 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGAAGCTGTCCGCCCTTCTGCGTCCGCTGGCCGCGCTCGCCCTGCTGTGCGCCGCGCCCGCCGTGTTCGCGCAGGCCCA GCCCGGCCTGCCGCTGCTGACCGGCACCGCCGGCGGCCAGAGCTATTCGCTGCCGGTCCAGACGCTGGTCTTCCTGACCT CGCTCGGCTTCCTGCCGGCCATCCTGCTGATGATGAGCAGCTTCACGCGCATCATCATCGTGCTGTCGCTGCTGCGCCAT GCGCTGGGCACGCAGACCACGCCGCCCAACCAGGTGCTGATCGGCCTGGCGCTGTTCCTGACCTTCTTCGTGATGTCGCC GGTGCTGGACAAGGTCTACACCGATGCCTACCTGCCGCTGCGCGACAGCAAGATCTCCGTGGAGCAGGCGCTCGACACCG CCGCCACGCCGCTGCGCCAGTTCATGCTCAAGCAGACCCGCGAGCCCGATCTCGCCCTGTTCGCCAAGATGGGCAACCTG CCGCCCATCGCCAGCCCGGACCAGGTACCGATGCGCGCGCTGATCCCGGCCTTCGTCACCAGCGAGCTGAAGACCGCGTT CCAGATCGGCTTCGCCATCTTCATCCCGTTCCTGGTGATCGATATCGTGGTGGCGGCGGTGCTGATGTCGATGGGGATGA TGATGGTCACGCCGTCCATCTTCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTGGACGGCTGGCATCTGCTACTG GGGTCGCTGGCCCAGAGCTTCACGCAATAG Protein sequence : MKLSALLRPLAALALLCAAPAVFAQAQPGLPLLTGTAGGQSYSLPVQTLVFLTSLGFLPAILLMMSSFTRIIIVLSLLRH ALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVYTDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGNL PPIASPDQVPMRALIPAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIMLFVLVDGWHLLL GSLAQSFTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-32 | 43 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 5e-32 | 43 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-31 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-28 | 42 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-23 | 42 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 1e-23 | 42 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-31 | 42 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-31 | 42 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-31 | 42 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-23 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 3e-23 | 41 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 5e-26 | 41 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 5e-26 | 41 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 5e-26 | 41 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-76 | 74 |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 6e-72 | 69 |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-59 | 62 |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 6e-62 | 61 |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 8e-31 | 41 |
| fliP | NP_521936.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 4e-30 | 41 |
