Gene Information

Name : fliQ (RSp0374)
Accession : NP_521935.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 479525 - 479794 bp
Length : 270 bp
Strand : -
Note : with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGACACCCGAATACGTGCTGAACATGGCCCGCCAGGCCATGCAGGTCGCCATGATGATCGGCGCGCCGATGCTGCTGGT
GTCGCTCATCGTCGGCCTGCTGGTGGCGGTGTTCCAGGCCGCCACCCAGCTCAACGAGCAGACGCTGTCGTTCATCCCCA
AGCTGCTGGCCGTGGCCGCCACCATGATCCTGGCCGGCCCGTGGGTCCTGGGCGTGATCGTCGACTACACGCGCGACGTG
CTCACCAATATCCCGAACTACGTCAACTGA

Protein sequence : 
MTPEYVLNMARQAMQVAMMIGAPMLLVSLIVGLLVAVFQAATQLNEQTLSFIPKLLAVAATMILAGPWVLGVIVDYTRDV
LTNIPNYVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 4e-08 42
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 1e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ NP_521935.1 flagellar biosynthesis protein FliQ VFG2495 Protein 3e-14 60
fliQ NP_521935.1 flagellar biosynthesis protein FliQ VFG2339 Protein 2e-14 52
fliQ NP_521935.1 flagellar biosynthesis protein FliQ VFG1260 Protein 5e-15 50
fliQ NP_521935.1 flagellar biosynthesis protein FliQ VFG2015 Protein 2e-12 46