Gene Information

Name : RSp1617 (RS02174)
Accession : NP_523176.1
Strain :
Genome accession: NC_003296
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 2034556 - 2035185 bp
Length : 630 bp
Strand : -
Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGAAACCCCATGATCTGCTGCCGCGGGCGGAAGCCCTCTTCCGCGAACTCGACGGCATGCCGCTTGCGGAGAAAGTGGC
CGCGCTCAACGCGCTGCGCCGGATCCTGCATGCGCACAGCCCGTTTCGCGATGAGCCGACCGACTGCGTGCAATGGGTGC
AGGGGGACCTGGTGCATGGCAACACGTACAACCCGAACGAGATCGCGCCGCCGGAGATGGCGCTGCTGGAGCGCTCGATC
CGGGCCGATGGCTACACGCAGCCGATCGTCACGCATCGCGCGCCGCTGTATTTCGAGGTGGTGGACGGCTTTCATCGCCA
GCGCATCGGCACGGAGTCGGTGGCGATCCGCGCGCGGCTGCACGGCTACCTGCCGATCGTGGCGATCCGGGCCGATCGGG
GCGGCGTCGACGATCGCATCGCGGCGACGATCCGGCACAACCGCGCGCGCGGCGTGCACGGCGTGCGCCCGATGACCGAG
GTCGTGATCGCCCTGCTGCGCGCGGGGTGGAGCGATAGCGACGTCGCCGCGGAACTGGGGATGGACAGCGAAGAAGTCTT
CCGCTTCAAGCAGGTCTCGGGCCTGCCGGAGCTTTTCCGGGATCGCCCCTACTCCATGTCATGGGATTGA

Protein sequence :
MKPHDLLPRAEALFRELDGMPLAEKVAALNALRRILHAHSPFRDEPTDCVQWVQGDLVHGNTYNPNEIAPPEMALLERSI
RADGYTQPIVTHRAPLYFEVVDGFHRQRIGTESVAIRARLHGYLPIVAIRADRGGVDDRIAATIRHNRARGVHGVRPMTE
VVIALLRAGWSDSDVAAELGMDSEEVFRFKQVSGLPELFRDRPYSMSWD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 3e-44 52
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 3e-44 52
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-44 52
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-44 52
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 9e-44 50
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-32 50
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-32 50
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-32 50
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 5e-39 49
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 4e-39 49
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-27 45
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 2e-27 45
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSp1617 NP_523176.1 hypothetical protein VFG1505 Protein 4e-44 50