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Name : popF1 (RSp1555) Accession : NP_523114.1 Strain : Genome accession: NC_003296 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1955501 - 1957681 bp Length : 2181 bp Strand : - Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAGTACCAACATCTCTAGCGCAGCGAGCCCGACCTTGCCGTTAGCCGGGCCGGGCGTCAACGGGCCAGCCGAGGGCAA ATCCGATATGCCGGGTTCGCTGTTCTTCCAGTTCGACCACTCCACGGGCAGCACCCGTCCGGACCTGCCGACCGACCTGT TCTTCAGCTTCGGCGATTCCATCTCGCGTGCGGTGCAGGACGCGTCGAATCAATCGCCGGAGCAGGCTCCGGCCGCCGAC CCGGCTCCGGCCAGCCCGGACGGCCAATCCTGCCAGCCGAGCCAGCCCGCCACCCCGCCCGTCGGCAGCGACGTGACCTG GAACGGCGGTACGCTCAACGACACCCAGTTGCAGATCATCGGCATCCTGAACCTGCACAAGGACAAGGGCGATATCAGCT GGGACAAGCTGCAGGACAAGATCAACGACCCCGACACGCCGCCCGACCTGAAGTGGGCACTGCAGGCGCTGTCGCAGGAT TTCAACCTGTTCCAGGCGATCGGCTCGCAGGGCGACGGCCGTTTCGGCGGCAAGATCAAGGGCAAGGATCTGGCCGAATT CGCCAAGAGCCATTCGCAGGTCCTGACGTGGAACAGCGGCACGCTCAACGACAGCCAGCTGGAGATCATGTCCATCCTGG CCCGCCACAAGGACAAGATGCCGGTCGACTGGAGCTCGATCCAGGACAAGATCAATGATCCCAGCACGCCGTCCGACCTG AAGGCCGCGCTGCAGGCGCTGGCCAACGATCCGGCGCTGTTCTTCGCCATCGGCTCGCAGGGCGACGGCAACTGCAAGGG CAAGATCAAGGCCGGCGACGTGAGCAAGTTCGCGGACAACCACCCGCAGGTGGAGGAATACAACCGCAAGAAGGCCGAAG GCTATGTGAAGAACTACATCCCGTCCGACGCGAAGCCGGGCGACAAGCCTTCGGCCATGACGCAGAACGATGCGCTGCGC GAGCTGTACCGCTACTCCGACTACCTGCCGAAGAAGCTGGACATGGAAGCCTTCCAGCGCATCGTCGACGGCGACTCGGA CGTCAAGAAGGCGCCGCCGCAGGTGATCGCCGCGGCCGAGTATTTCCTGCAGAACCGCAACGAGTGGGCGAGCCTGAACA AGATGGACGACCCCGACAAGCGGGTGGGCAAGTCGGACTTCCTGCAGCGCGCCGCCTCGGCCGTGCACCTGAGCAAGGAA GATCTGCAGACCGTGTCGACCATCAACAGCAATCTCGACGTGTTCTTCAAGGACGGCCAGAAGATCACCCGCGACCGGCT GGCGGCGATGTCGCAGGACGAGAGCCTGTCTCCGGCCGTGCGCAACGCGGCCAAGCAGCTGCTGCAGGATCCGCTGCTGT ACGGGCTGATCAACAACGCGAACTCGGGCTACAAGACGAAGAACGGCTTCTTCAGCTTCGGCGGCCCGACGGTGGATTCC GGCGTGATCGGCAAGAAGGACTTCGAGAAGTTCATGTCGAGCATGACGGACGCCAACAAGACGGTCCAGGCGCGCAAGAC GCATCCGGCGAACTCGGAGGCCAGCAAGAGCGCCGTTGCCGACATGGGCATGGGCATGGAAGACCAGCCCGACATCAAGG CGGTCAAGAAGAGCGGCGGCGCGCTGAAGAAGGCCATGGACAAGATCCTCACCATCTACTCGAAGGTGATGGACATCGCG TCGCAGGTCGTTGGTGCGCTGGGCGTGATTCCGGGGCTGGGTGAAATCGCGGACGCGCTGTCGATGGGGATGGCCGCCGG GGCCTCGGCGGCCAAGGTGCTGTCGACCCTGCTGAACGGGGGCAGCCTCAAGAAGGCGCTGGCGGAGGCGGGCATCAACC TGGCCTCCGCTGCGCTGGGGGCCGTCGCCGGACCGGAGGCGCGGGTGGCGCTCAAGAACGGCCTGACCAAGATGCTCGTG GAGAAGGTGGCCAACACCGGCATCGATCTGGCGGTCGACAAGGCGAAGTCGTTCGTGGATGGTTACCTGCAGGACCTGAA GGGCCGCCTGCAAGCCACCGCGGCCAACGCCGCCAACACGGTCAACACCAGCGTCAACTGGGTGTCGGACAAGACGAAGG ACTTCCTGGAGAACCCGGTGCAGAACCTGACGCCCCGTGTGAATATCCCCGGCATCACCCCGTATCAGCCGGGCTATCCG ATGGTGGCGGCGGCGGCCTGA Protein sequence : MSTNISSAASPTLPLAGPGVNGPAEGKSDMPGSLFFQFDHSTGSTRPDLPTDLFFSFGDSISRAVQDASNQSPEQAPAAD PAPASPDGQSCQPSQPATPPVGSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQALSQD FNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTPSDL KAALQALANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKPGDKPSAMTQNDALR ELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNRNEWASLNKMDDPDKRVGKSDFLQRAASAVHLSKE DLQTVSTINSNLDVFFKDGQKITRDRLAAMSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDS GVIGKKDFEKFMSSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMDKILTIYSKVMDIA SQVVGALGVIPGLGEIADALSMGMAAGASAAKVLSTLLNGGSLKKALAEAGINLASAALGAVAGPEARVALKNGLTKMLV EKVANTGIDLAVDKAKSFVDGYLQDLKGRLQATAANAANTVNTSVNWVSDKTKDFLENPVQNLTPRVNIPGITPYQPGYP MVAAAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 1e-110 | 50 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 8e-111 | 50 |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 4e-119 | 49 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 4e-110 | 49 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 4e-119 | 47 |
