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Name : RSc0413 (RSc0413) Accession : NP_518534.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 439882 - 440883 bp Length : 1002 bp Strand : - Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : TTGTTATACTTCGCCGCCATGATAGCGAATTTCAATCCGGATCGAGCGCTGGCCCTGGCCCAGCAGACCTTCGACATCGA AGCGCAGGCCGTGCTCGGTCTCAAGTCCCAGGTTTCCGCCGACTTTGCGCGCGCGGTCGAGATGGTGCTGCGCTGCACCG GCCGCGTGGTCGTTTCGGGCATCGGCAAATCCGGCCATATCGCGCGCAAGGTGGCGGCCACGCTCGCCTCCACCGGCACG CCGGCGTTCTTCGTCCACCCCGCCGAAGCCAGCCACGGCGACCTCGGCATGGTCACGCGCGACGACGTCTTCATCGGCTT CTCCAATTCCGGCGAGGTATCGGAGCTGACCGCCATCCTGCCGCTGGTCAAGCGGCTGGGCGCCAGGCTGATCGCCGTGA CGGGCAATCCGCAATCGTCGCTGGCGCAGCACGCCGACGTCATACTGAACTCGCGCGTCGAGGTCGAGGCCTGCCCGCTC AACCTGGCGCCGACCGCCAGCACCACCGCGCAAATGGCCCTGGGCGACGCCCTGGCCGTGGCTCTGCTCGATGCGCGCGG CTTCGGCGCAGACGATTTCGCCCGCTCGCACCCCGGCGGCTCGCTCGGGCGCAAGCTGCTCACGCACGTGCGCGACATCA TGCGCCAGGGCGACGCCGTGCCGCGCGTGACCGAAGACACGCCGCTGTCGCAGGCGCTGATGGAAATCACCCGCAAGGGC ATGGCGATGACCGCCGTGGTCGACGCCACGGGCCGCGCCGTAGGGGTCTTCACCGACGGCGACCTGCGCCGCCTGCTGGA AACCCCGCGTGACTGGCGCACCGTGCCGATGCACGAAGTGATGCACCGCAATCCGCACGCGGTCGGCCCCGACCAGTTGG CGGTCGAGGCGGTCGAAGTGATGGAAACGCATCGCATCAACCAGCTGCTGGTGGTGGACGCCGCCGGGCAGCTGATGGGC GCGCTGCACATCCACGACCTGACCCGCGCCAAGGTCATCTGA Protein sequence : MLYFAAMIANFNPDRALALAQQTFDIEAQAVLGLKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGT PAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLVKRLGARLIAVTGNPQSSLAQHADVILNSRVEVEACPL NLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDIMRQGDAVPRVTEDTPLSQALMEITRKG MAMTAVVDATGRAVGVFTDGDLRRLLETPRDWRTVPMHEVMHRNPHAVGPDQLAVEAVEVMETHRINQLLVVDAAGQLMG ALHIHDLTRAKVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-56 | 46 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-56 | 46 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-56 | 45 |
