Gene Information

Name : nasD (RSc0379)
Accession : NP_518500.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : nitrate ATP-binding ABC transporter protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 407924 - 408730 bp
Length : 807 bp
Strand : -
Note : Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence : 
ATGTCCGACAAATTCCTGCGCATCGAAAGCGTTGGCCAGGTCTTCAAGACCCGGAAAGGCCCGTTCGTCGCGCTGCGCGA
CATCGACCTGAGCGTGGCGCGCGGCGAGTGCATCGCCCTGATCGGCCACTCGGGCTGCGGCAAGTCCACGCTGCTGAACC
TGATCGCCGGGCTGACCCGGCCGACCTCGGGCGGGCTGATCCTGGCCGAGCGCGAGATCGCGGGGCCGGGGCCGGACCGC
GCGGTGGTGTTCCAGAACCACTCGCTGCTGCCGTGGCTGACCTGCTTCGACAACGTGTACCTGGCCGTCGAGCGCGTGTT
CGGCAAGACCGAATCGAAGGCGGACCTGAAAGCGCGCACGCACGCGGCGCTGGCGCTGGTCGGCCTGTCGCACGCCGAGC
ACAGGCATCCGCACGAGATCTCCGGCGGCATGAAGCAGCGCGTCGGCATCGCCCGCGCGCTGTCGATGGAACCGAAGGTG
CTGCTGATGGACGAGCCGTTCGGCGCGCTCGACGCGCTCACCCGCGCGCACCTGCAGGACGCGCTGCTGAAGATCATCGC
CGCGACCGGCAGCACGGTGGTGATGGTCACGCACGATGTGGACGAAGCCGTGCTGCTGGCCGACCGCATCGTCATGATGA
CCAACGGCCCGGCCGCGACCATCGGCGAGGTACTGACCGTCGGCCTGCCGCGCCCGCGCGTGCGGCTGGCGCTGGCCGAC
GATCCGGCCTACCACGCCTGCCGCACCGCCGTGCTCGATTTCCTCTACCGCAAGCAGCGCCACCCCGCGATGGAGGAAGC
GGCGTAG

Protein sequence : 
MSDKFLRIESVGQVFKTRKGPFVALRDIDLSVARGECIALIGHSGCGKSTLLNLIAGLTRPTSGGLILAEREIAGPGPDR
AVVFQNHSLLPWLTCFDNVYLAVERVFGKTESKADLKARTHAALALVGLSHAEHRHPHEISGGMKQRVGIARALSMEPKV
LLMDEPFGALDALTRAHLQDALLKIIAATGSTVVMVTHDVDEAVLLADRIVMMTNGPAATIGEVLTVGLPRPRVRLALAD
DPAYHACRTAVLDFLYRKQRHPAMEEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-40 44
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-29 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-28 41