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Name : kdpB (RSc3383) Accession : NP_521502.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.10 Position : 3643640 - 3645874 bp Length : 2235 bp Strand : + Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGCTCTCCGCTATCCTGAATCCGATCCGGTGGTGCGCACCGTCAAGCACCGCCTGGACAGCACGGACGCTGCCGCCCA TGCCGCCGCGCCCGCCCGCACCACCACGCACCCCGGCGCGCACCCTCCGCTGAGCGCCAAGGACGTGCGCCGGCTGTCGA TGTTCGCGCCGGCACTGGTCAGGCCCGCCATCGTCGACAGTTTCCGCAAGCTGTCGCCGCGCGCGCAGGCCAAGAACCCG GTGATGTTCGTCGTCTATATCGGCAGCATCCTGACCACCCTGCTGTGGGTGATGGCGCTGCGCGGCCAGGCCGAGGCGCC GGCGGGCTTCATCCTCGCCGTGTCGGTGTGGCTGTGGTTCACCGTGCTGTTCGCCAACGTTGCCGAGGCGCTGGCCGAGG GCCGCAGCAAGCAGCAGGCCGCCTCGCTGCGCGGCATCAAGACCACCGTGCAGGCCAAGGTGCTGGCCGATCCCCAGCGG CGCGACCGCGTGCAGCCGCGCGCGGCCACCGCGCTGCGCCGTGGCGACATCGTCCTCATCGAAGCCGGCGACATGGTGCC CGGCGACGGCGAGGTCATCGAAGGCGTGGCCTCGGTGGACGAGAGCGCCATCACCGGGGAATCCGCGCCGGTGATCCGCG AGTCCGGCGGCGATTTCTCGTCGGTCACCGGCGGCACGCGCGTGCTGTCGGACTGGATCGTGGCGCGCATCACCGCCAAC CCGGGCGAGAGCTTCCTCGACCGCATGATCTCGATGGTGGAAGGCGCCAAGCGGCAGAAGACGCCCAACGAGCTGGCGCT GACCATCCTGCTGGTGAGCCTGACCATCATCCTGCTGCTGGCGACCGTCACGCTGCTGCCGTACTCGATCTTCTCGGTGG AGGTGATGAAGGCCGCGGGCGTGACAAGTTCGCCGATCACCATCACCGTGCTGGTGGCGCTGCTGGTGTGCCTGATCCCG ACCACCATCGGCGGGCTGCTGTCGGCCATCGGCGTGGCCGGCATGAGCCGCATGATGCAGGCCAACGTGATCGCCACCTC GGGCCGCGCGGTGGAAGCCGCCGGCGACGTCGACGTGCTGCTGCTCGACAAGACCGGCACCATCACGCACGGCAACCGCC AGGCCTCGCGCTTCATCCCCGCGCCGGGCGTGACGGTCAAGGCGCTGGCCGAGGCCGCGTGGCTGTCGTCGCTGGCCGAC GAGACGCCCGAGGGCCGCAGCATCGTCACGCTGGCGCGCCAGCTGGGCGAGGCCGCCGTCGACGAGGCGGCGCTGGCGCG GTCGCAGCCGGTGTTCGTGCCCTTCTCCGCGCAGACGCGCATGAGCGGCATCAACGTGGCCCTGGGCGACGCAGCGCACC AGATCCGCAAGGGCGCCGCCGATGCCATCCGCACGCACGTGACGGTGCTGGCCGGCCGGTTTCCCGAGGCCGTGCTGGCC GCCGTGGAAGACGTGGCGCGCAAGGGCGGCACGCCACTGGTGGTGTCCGACAACGACCGCGTGATGGGCGTGGTGGAACT GAAGGACATCGTCAAGGCCGGCATTCGCGAGCGCTTTGCCGAGCTGCGCCAGATGGGCATCAAGACGGTGATGATCACCG GCGACAACCGCCTGACCGCCGCCTCCATCGCGGCCGAAGCGGGCGTCGACGACTTCATCGCCGAGGCCGCGCCCGAGACC AAGCTCGCGCTGATCCGCGAACAGCAGGCGCAGGGCCGCCTCGTCGCCATGACCGGCGACGGCACCAACGACGCGCCCGC GCTCGCCCAGGCCGATGTGGCGGTCGCCATGAACAGCGGCACGCAGGCGGCCAAGGAGGCCGGCAACATGGTCGACCTGG ATTCCAGCCCGACCAAGCTGATCCAGATCGTGGAGATCGGCAAGCAGATGCTGATGACGCGCGGCTCGCTCACCACGTTC TCCATCGCCAACGATGTGGCCAAGTATTTCGCCATCATCCCGGCGGCGTTCGCGACCACGTATCCGCAACTGGCCGCGCT CAACGTGATGCGCCTGGCCACGCCCGCGTCGGCCGTGATGAGCGCGGTGATCTTCAACGCGCTGATCATCGTGTTCCTGA TCCCGCTGGCGCTCAAGGGCGTGAAGTACCGCCCGCTCGGCGCCGCCGCGCTGCTGCGCCGCAATCTCTGGATCTACGGC CTGGGCGGCCTGCTGCTGCCCTTCCCCGGCATCAAGCTGATCGACATGTTCCTGGCCGCGATGGGCTGGGTCTGA Protein sequence : MALRYPESDPVVRTVKHRLDSTDAAAHAAAPARTTTHPGAHPPLSAKDVRRLSMFAPALVRPAIVDSFRKLSPRAQAKNP VMFVVYIGSILTTLLWVMALRGQAEAPAGFILAVSVWLWFTVLFANVAEALAEGRSKQQAASLRGIKTTVQAKVLADPQR RDRVQPRAATALRRGDIVLIEAGDMVPGDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVARITAN PGESFLDRMISMVEGAKRQKTPNELALTILLVSLTIILLLATVTLLPYSIFSVEVMKAAGVTSSPITITVLVALLVCLIP TTIGGLLSAIGVAGMSRMMQANVIATSGRAVEAAGDVDVLLLDKTGTITHGNRQASRFIPAPGVTVKALAEAAWLSSLAD ETPEGRSIVTLARQLGEAAVDEAALARSQPVFVPFSAQTRMSGINVALGDAAHQIRKGAADAIRTHVTVLAGRFPEAVLA AVEDVARKGGTPLVVSDNDRVMGVVELKDIVKAGIRERFAELRQMGIKTVMITGDNRLTAASIAAEAGVDDFIAEAAPET KLALIREQQAQGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSSPTKLIQIVEIGKQMLMTRGSLTTF SIANDVAKYFAIIPAAFATTYPQLAALNVMRLATPASAVMSAVIFNALIIVFLIPLALKGVKYRPLGAAALLRRNLWIYG LGGLLLPFPGIKLIDMFLAAMGWV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 4e-157 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 3e-157 | 59 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-139 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-138 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-138 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-138 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-138 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-138 | 53 |
