Gene Information

Name : RSc3347 (RSc3347)
Accession : NP_521466.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Resistance
Product : transcription regulator protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 3608103 - 3608582 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence : 
ATGACCCGTGCCGACCTGAACGATGCATCGCAAGACGGCCCCGTCAACATCGGCGAGGCGGCCAGGGCCAGCGGCGTGTC
GGCCAAGATGATCCGCTACTACGAGCGCATCGGTCTGCTGCCGCCCAGCCCGCGCACCGAGGGCAACTACCGGGTCTATG
ATCCGCGCGCGCTGCACGTGCTGCGGTTCATCCACCGGGCGCGTTCGCTCGGGTTTTCGCTCGAAGAGATTCGCACGCTG
CTCTCGCTGTGGCACGACCGCGCGCGCGCCAGCGCCGACGTGAAGGCCATCACGCTGCGCCACGTGGCCGACCTCGACGC
GCGCATCCGCGAGCTGCAAGGCATGCGCGATACGCTGGTGACGCTCGCCGATGCCTGCCATGGCGACGACCGCCCGGACT
GCCCGATCCTCGAGGGCGTGGCCGGGGAGGCTTCGCCCTGCTGCGATGCAGCGCTGCCCGATCCGGACCGACACGGCTGA

Protein sequence : 
MTRADLNDASQDGPVNIGEAARASGVSAKMIRYYERIGLLPPSPRTEGNYRVYDPRALHVLRFIHRARSLGFSLEEIRTL
LSLWHDRARASADVKAITLRHVADLDARIRELQGMRDTLVTLADACHGDDRPDCPILEGVAGEASPCCDAALPDPDRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 6e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSc3347 NP_521466.1 transcription regulator protein BAC0190 Protein 3e-39 57
RSc3347 NP_521466.1 transcription regulator protein BAC0569 Protein 7e-31 53
RSc3347 NP_521466.1 transcription regulator protein BAC0182 Protein 1e-33 50
RSc3347 NP_521466.1 transcription regulator protein BAC0105 Protein 7e-29 46
RSc3347 NP_521466.1 transcription regulator protein BAC0462 Protein 6e-23 42