Gene Information

Name : gspG (RSc3106)
Accession : NP_521227.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Virulence
Product : general secretion pathway G protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3343963 - 3344433 bp
Length : 471 bp
Strand : +
Note : Product confidence : Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence : 
ATGATGCAAGGCCAACTCCGCACCCCCGTCCGCCAACGCGCCTTCGCCCGTCGCGCGGCACGCGGCTTCACGCTGATCGA
GATCATGGTGGTGGTGGTGATTCTCGGCATCCTGGCCGCGCTGGTGGTCCCGAAGATCATGAGCCGGCCCGATGAGGCGC
GCATCATCGCGGCCAAGCAGGACATCGCTTCCATCTCGCAGGCGCTCAAGCTGTACCGGCTGGACAACGGCCGCTACCCG
ACCACCGAGCAGGGCCTTGCCGCGCTGGTCACCAAGCCGACCACCGAGCCGGTCCCGAACAACTGGAAGGGCGGCGGCTA
TCTGGAACGCCTGCCGAAAGACCCGTGGGGCCACCCGTACCAGTACCTGAACCCAGGCGTGCGCGGCGAAGTCGACATCT
TCAGCTACGGCGCCGACGGCCAGCCCGGCGGCACCGCCAACGATGCCGACATCGGCAACTGGGACAATTGA

Protein sequence : 
MMQGQLRTPVRQRAFARRAARGFTLIEIMVVVVILGILAALVVPKIMSRPDEARIIAAKQDIASISQALKLYRLDNGRYP
TTEQGLAALVTKPTTEPVPNNWKGGGYLERLPKDPWGHPYQYLNPGVRGEVDIFSYGADGQPGGTANDADIGNWDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-25 51
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-25 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG NP_521227.1 general secretion pathway G protein VFG1871 Protein 5e-35 67
gspG NP_521227.1 general secretion pathway G protein VFG0180 Protein 5e-32 62
gspG NP_521227.1 general secretion pathway G protein VFG2050 Protein 8e-26 51