|
Name : vsrD (RSc0292) Accession : NP_518413.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Virulence Product : response regulator transcription regulator protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2197 EC number : - Position : 324173 - 324805 bp Length : 633 bp Strand : - Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGATTCGCGTCCTGATTGCGGACGACCATGAAATCGTCCGCGCCGGTCTTCGGCAGTTCCTGTCGGAAGAGCGGGACAT CGAAGTGGCGGGGGAGGCGGCCAGCGGGGAAGAGGTGATGGAGCAACTGCGCACCGGAACCTTCGACGTGGTGGTTCTGG ACATCTCCATGCCCGACCGCAACGGCATCGACACGCTCAAGCTGGTACGGCAGCGTCACCCGGACCTGCCGGTGCTGATC CTGTCCACCTTTCCGGAAGACCAGTACGCGATCAACCTGATCCGGGCCGGCGCCTCGGGCTACCTGACCAAGGAAAGCGC GCCGGACGAACTCGTCAAGGCCATCCGCACCGTCTCGCAAGGGCGCCGTTACGTGAGCCCGACGGTCGCCGAACTGCTGA TCGGCGGGCTGGAGAAGCCGACCGACCAGCCGCTGCACCAGACCCTGTCCAAGCGCGAATTCCAGATCTTCTGCAAGCTG GCGCGTGGCCAGTCGGTCTCGATCATCGCCGAAGAGTTGTTCCTGAGCGTCAAGACGGTCAGCACGTACCGCACCCGCAT CCTGGAAAAGATGGGCATGAAGTCGAACGCCGACCTGACGTATTACGCCATCAAGAACGGACTGGTGGAATGA Protein sequence : MIRVLIADDHEIVRAGLRQFLSEERDIEVAGEAASGEEVMEQLRTGTFDVVVLDISMPDRNGIDTLKLVRQRHPDLPVLI LSTFPEDQYAINLIRAGASGYLTKESAPDELVKAIRTVSQGRRYVSPTVAELLIGGLEKPTDQPLHQTLSKREFQIFCKL ARGQSVSIIAEELFLSVKTVSTYRTRILEKMGMKSNADLTYYAIKNGLVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00302 | YP_008207767.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR25 | Protein | 3e-29 | 43 |
| BJAB0868_00306 | YP_008211632.1 | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | Not tested | AbaR26 | Protein | 3e-29 | 43 |
| hrpY | AAD24683.1 | response regulator HrpY | Virulence | Hrp PAI | Protein | 1e-29 | 41 |
