Gene Information

Name : RSc2896 (RSc2896)
Accession : NP_521017.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 3124052 - 3124564 bp
Length : 513 bp
Strand : +
Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGGCCGGCCCCACACTCGCCCAGACTGTCCGACGCAGCCGCCCGGATGGCCACAGGCTTGCGGGCCTGCGCTGGATCCG
CGCGGGTGCGGCGCTGGCGCTATGCCTGTCGAGCCTGGCGGCCCAGGCGGCGGGGGACTGCTTCGAGCAGGCCGGGGCCT
ACCAGGGCGTCAATCCAACCGTGCTGCGCGCGATCGCGTGGTTCGAGTCAAAGGGCGACCCGCGCGCCGTGCATCGCAAT
GCCGACGGGTCGGTCGATATCGGCCAGGCACAGATCAATTCGATCCACTTCGGCACGCTGGCGCGCTACGGTGTGCCGCA
GCACGCGCTGACCGATGCCTGCGTCAACATCTACGTGGCCGCGTGGCTGCTCAAGCAGAAGATGGTGAAGCACGGCAACA
CGTGGCGCGCCATCGGCGCCTACCACTCCGAGACGCCCGCGCAGCGCGATGCCTATGCGCGCAGCATCCAGCGCGTGCTG
GTGACGTGGGGCGAACTGAAGCCCGGGCAGTGA

Protein sequence :
MAGPTLAQTVRRSRPDGHRLAGLRWIRAGAALALCLSSLAAQAAGDCFEQAGAYQGVNPTVLRAIAWFESKGDPRAVHRN
ADGSVDIGQAQINSIHFGTLARYGVPQHALTDACVNIYVAAWLLKQKMVKHGNTWRAIGAYHSETPAQRDAYARSIQRVL
VTWGELKPGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa2 NP_640772.1 Hpa2 protein Virulence Hrp PAI Protein 9e-30 57
hpaH YP_362172.1 transglycosylase HpaH Virulence Hrp PAI Protein 1e-29 57
hpaH AAL78295.1 HpaH precursor Virulence Hrp PAI Protein 7e-30 57
hpa2 AAF61278.1 Hpa2 precursor Virulence Hrp PAI Protein 2e-29 57