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Name : gabD1 (RSc0028) Accession : NP_518149.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 32580 - 34073 bp Length : 1494 bp Strand : - Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGACCCGCACCGATCTGCCACCGGCACCGATCACGCTCAACGACCCGGCGCTGTGGCGCACGCAAGCCTTCCTGGCCGG CGCGTGGACCGATGCCGATGACGGCAGCACCCGCGACGTGACCGACCCCGCCACCGGCCGCGTGATCGGCACGGTGCCCG CGATGGGCGCCGCGGAGACGCGCCGCGCCATCGAGGCCGCGCAGGCCGCGCAGCGCGCCTGGCGCAAGGTGACCGCGCGC GAGCGCGCCCGGATCCTGCGCAAGCTGGCCGACCTGATGCTGGAGCACCAGCAGGACCTGGCCCGCATCCTGACCGCCGA GCAGGGCAAGCCGCTGCCCGAGGCCACGGGCGAGATCGCCTATGCCGCCTCGTTCATCGAGTGGTTTGCCGAAGAGGCCC GCCGCGTCTACGGCGACACCATCCCCGCGCCGCAGGGCGACCGCCGGATCGTCGTCAACAAGGAACCGATCGGGGTGACG GCGGCGATCACGCCGTGGAACTTCCCCATCGCGATGATGACGCGCAAGGTCGGCCCGGCGCTGGCGGCCGGCTGCGCGAT GGTGGTCAAGCCCGCGCTGGAGACACCTTACTCCGCGCTGGCCTTCGCGGAACTGGCCGCGCGCGCGGGCGTGCCGGCGG GGCTGCTGTCCATCGTCACCGGCGACGCGCAGGGCATCGGCGGCGAGCTGACCGCCAACCCCGTCGTGCGCAAGCTGAGC TTCACCGGCTCCACGGCCGTCGGCCGCCTGCTGATGCGCCAGTGCGCCGACGACGTGAAGAAGCTGTCGCTGGAGCTGGG CGGCAACGCGCCCTTCATCGTGTTCGACGATGCCGATCTCGATGCCGCCGTGGAAGGCGCGATGGTGGCCAAATACCGCA ACGCCGGCCAGACCTGCGTGTGCGCCAACCGCTTCTACGTGCAGCGCGGCATCTATGACGCCTTCGCCGCCAGGCTGAGC GAGGCCGTGCGCGCGCTGCGCGTGGGCAACGGTGCCGAGCCGGGCGTGCAGCAGGGCCCGCTGATCCACCAGCGCGCGAT GGACAAGGTGCGCGCCCACGTGGACAACGCCGTCGCGCAGGGCGCCCGCGTGCTCGTCGGCGGCAAGCCGCATGCGCTGT CGGCCCAGGGCGGGGCCTTCTTCGAGCCGACCGTCATCGTGGATGCCCGGCCCGGCATGCTGGTCGCGCACGAGGAGACC TTCGGCCCGCTGGCCGCGCTGATCCCGTTCGACACCGAAGACGAAGCCGTGGCCGCCGCCAACGACACCGAGTTCGGCCT GGCCGCGTATTTCTACACGCGCGACCTGGGCCGCGCGTGGCGCGTGTCGGAAGCGCTGGAGAGCGGCATGGTCGGCGTCA ACACCGGATTGATCTCGACGGCCGAGGCGCCGTTCGGCGGCGTCAAGCAATCGGGCCTGGGCCGCGAAGGCTCCAAGTAC GGCATCGACGAGTACCTGGAGATCAAGTACGTCTGCATGGCCGGGCTCGGCTGA Protein sequence : MTRTDLPPAPITLNDPALWRTQAFLAGAWTDADDGSTRDVTDPATGRVIGTVPAMGAAETRRAIEAAQAAQRAWRKVTAR ERARILRKLADLMLEHQQDLARILTAEQGKPLPEATGEIAYAASFIEWFAEEARRVYGDTIPAPQGDRRIVVNKEPIGVT AAITPWNFPIAMMTRKVGPALAAGCAMVVKPALETPYSALAFAELAARAGVPAGLLSIVTGDAQGIGGELTANPVVRKLS FTGSTAVGRLLMRQCADDVKKLSLELGGNAPFIVFDDADLDAAVEGAMVAKYRNAGQTCVCANRFYVQRGIYDAFAARLS EAVRALRVGNGAEPGVQQGPLIHQRAMDKVRAHVDNAVAQGARVLVGGKPHALSAQGGAFFEPTVIVDARPGMLVAHEET FGPLAALIPFDTEDEAVAAANDTEFGLAAYFYTRDLGRAWRVSEALESGMVGVNTGLISTAEAPFGGVKQSGLGREGSKY GIDEYLEIKYVCMAGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-144 | 65 |
