Gene Information

Name : RSc2504 (RSc2504)
Accession : NP_520625.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : glucose-1-dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : 1.1.1.47
Position : 2710733 - 2711479 bp
Length : 747 bp
Strand : -
Note : Converts glucose to D-glucono-1,5 lactone

DNA sequence :
ATGTCCAAGACCATCGTCATCACCGGCGGCAGCAGGGGCATCGGCCGCGCCACGGCGGTTCTGTGCGCGCGGCGCGGGTG
GTCCGTGGCGATCCAGTATCGCGGCAACCGGCAGGCCGCCGACGAGACGGCGGGCCTCGTCGAGCAGGCCGGCGGCCGGC
TGCTGGCGGTGCAGGGCGATGTGTCGAGCGAGGCGGATGTGATGGCGCTGTTCGAGGCGGCGCAGGACCGCTTCGGCGCG
CTGCACGGCGTGGTCAACAACGCCGGCATCGTGGCGCCCGCGCAGGACGTGGCCGACATGAGCGCACAGCGGCTGCGCGC
GATATTCGAGACCAATGTGCTGGGCGCGTTCCTGGTGGCGCGCGAAGCGGCGCGGCGGCTGTCGACCGCGCGCGGCGGCG
CGGGCGGTGCGCTGGTGAATGTGTCTTCGGCGGCGGCGCGGCTCGGCTCGCCGCACGAATATGTCGACTACGCCGCCTCC
AAGGGCGCGGTGGACACCATGACGCTGGGCCTGGCGCGCGAACTGGGCCGCGAGGGTGTGCGCGTCAACGCGGTGCGCCC
CGGCCTGATCGACACCGAGATCCACGCTTGCGGCGGCCAGCCGGATCGTGCCCAGCGCCTGGGTGCCGCCACGCCGATGG
GCCGGCCCGGCACCGCCGCGGAGGTGGCCGAGACCATCGTCTGGCTGCTGTCGGATGCGGCGTCGTACGTGACGGGGGCG
CTGCTGGACTGCTCAGGCGGGCGCTGA

Protein sequence :
MSKTIVITGGSRGIGRATAVLCARRGWSVAIQYRGNRQAADETAGLVEQAGGRLLAVQGDVSSEADVMALFEAAQDRFGA
LHGVVNNAGIVAPAQDVADMSAQRLRAIFETNVLGAFLVAREAARRLSTARGGAGGALVNVSSAAARLGSPHEYVDYAAS
KGAVDTMTLGLARELGREGVRVNAVRPGLIDTEIHACGGQPDRAQRLGAATPMGRPGTAAEVAETIVWLLSDAASYVTGA
LLDCSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-59 53
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 9e-52 52