Gene Information

Name : lspA (RSc2459)
Accession : NP_520580.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 2668195 - 2668716 bp
Length : 522 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGGCCACTCGCAACAACGGCAAGAGCAAGGCCGCAGGCAGCAAAAGCGGCGGCGGCCATGGCGTGGGCCCCTGGCTGGG
CCTGGGCGTCATCTGGATCCTGCTGGACCAGTTGACCAAAATCGCCATCCTCAAAACCTTCGCCTACGGCGAGTCGCGCC
CGATCACCGGGTTCTTCAACCTGGTGCTGGCCTACAACCGGGGCGCGGCATTCTCGTTCCTGGCGGCGGCAGGCGGCTGG
CAGCGCTGGTTCTTCACCGGCCTGGGCGTGGCCGCGGCGCTGTTCATCGTGTGGCTGCTCAAGCGCCACAGCGGGCAGAA
GCTGTTCTGCTTTGCGCTGGCGCTGATCCTCGGCGGGGCGCTGGGCAACGTGATCGACCGTCTCGTCTACGGCCACGTGG
TGGACTTCCTCGACTTCCACCTGCGCGGCTACCACTGGCCCGCGTTCAACGTCGCCGATTGCGGCATCTGCATCGGCGCG
GTGCTGCTGATCATCGACGAGCTGCGGCGGGTTCGCCGCTAG

Protein sequence :
MATRNNGKSKAAGSKSGGGHGVGPWLGLGVIWILLDQLTKIAILKTFAYGESRPITGFFNLVLAYNRGAAFSFLAAAGGW
QRWFFTGLGVAAALFIVWLLKRHSGQKLFCFALALILGGALGNVIDRLVYGHVVDFLDFHLRGYHWPAFNVADCGICIGA
VLLIIDELRRVRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 8e-13 51
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 9e-09 50
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-08 50
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-08 50
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 6e-10 49
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 9e-10 49
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 9e-10 49
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 6e-10 49
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 6e-10 49