|
Name : tISRso11b (RSc2408) Accession : NP_520529.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : isrso11-transposase orfb protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2613253 - 2614089 bp Length : 837 bp Strand : - Note : predicted by Homology DNA sequence : GTGAGTGCGCTGCGTGAGCGGCATTCATTGTCGAGCTTGCTCAAGGCCGCGAATCTCGCACGCAGCACGTACTACTACCA GATGGCGACAGGCCAGGCAGAGGATCGTCACGGCGCGCTCAAGGAGCGCATTCAGCACATCTATGCCCAGCACAAGGGCC GATATGGCTACCGCCGGATCACGGCGACGCTCCGTCGGGCAGGGACGTTGGTGAATCACAAGACCGTACAGCGATTGATG TCGGCGCTACAGTTGAAGTCACTCGTGCGGCCGAAGAAATACCGCTCTTACCTCGGGCAAGTCGGGCGGGTTGCTCCCAA TCTGCTACAGTGCGAGTTTGAGGCGAGCAAGCCGAACGAGAAGTGGGTAACGGACGTGACGGAGTTCAACGTCGGCGGCA AAAAGCTGTACCTGTCGCCCGTCCTGGACCTATACAACGGAGAGATCGTCGCCTGGCAAACCAGTGAACGACCTGATTAC ACGCTGATCCGGGAGATGCTCGACAAGGCGTTGCGCAAGCTGCGCCCGTGCGAGACGCCGATGCTGCATTCGGATCAAGG CTGGCCGTATCAAATGGCAGCGTATCGTCGCAAACTGGCCGCGCGAGGCCTGCGCCAGAGCATGTCCCGCAAAGGCAACT GCCTAGACAATGCGGCAATGGAAAGCTTCTTCGGCACACTCAAGTCAGAGTGCTTCCGGTTAGAGCGCTTCGCGGACATC GACCAACTGCGACGCGCCATTGCCGAATACATCCGGTACTACAATCACGAGCGCATCAAGATCAAGCTAAAAGGGCTGAG CCCTGTGCAATACAGGACCCAGCCCTTGGCCGCCTAA Protein sequence : MSALRERHSLSSLLKAANLARSTYYYQMATGQAEDRHGALKERIQHIYAQHKGRYGYRRITATLRRAGTLVNHKTVQRLM SALQLKSLVRPKKYRSYLGQVGRVAPNLLQCEFEASKPNEKWVTDVTEFNVGGKKLYLSPVLDLYNGEIVAWQTSERPDY TLIREMLDKALRKLRPCETPMLHSDQGWPYQMAAYRRKLAARGLRQSMSRKGNCLDNAAMESFFGTLKSECFRLERFADI DQLRRAIAEYIRYYNHERIKIKLKGLSPVQYRTQPLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 1e-75 | 56 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 6e-58 | 55 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 5e-58 | 55 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 2e-62 | 50 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 1e-44 | 47 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 6e-45 | 47 |
