|
Name : hemC (RSc2357) Accession : NP_520478.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : 2.5.1.61 Position : 2556982 - 2557986 bp Length : 1005 bp Strand : - Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : ATGTCTTCAAACGCCCGTCCGACCTCCGTCGAATCCCCTCTGGCAGCCCAGGCGCCGACCAAGCTGGTCATCGCCTCGCG CGAAAGCCGGCTCGCCATGTGGCAGGCCGAATACGTGCGTGCTGCGTTGCAAAAATACTATCCCGCGTGCGACGTGTCCA TCCTGGGCATGACTACGCGCGGTGACCAGATTCTCGACCGCTCGCTCGCCAAGGTGGGCGGCAAGGGCCTGTTCGTGAAG GAGCTCGAGGTCGCGCTCGCCGAGGGCCGCGCCGACCTCGCCGTCCACTCGCTCAAGGACGTGCCGATGGAGCTGCCGCC GGGCTTCGTGCTGTCGGCCATCCTCGAGCGCGAGGATCCGCGTGATGCCTTTGTCTCCAATGATTACGCCGATCTCGCCG CGCTGCCCGCGGGCGCGGTGGTGGGCACCTCCAGCCTGCGCCGCGAGGCGTCGCTGCGGGCGCGCTTTCCGCACCTGGTC ATCCAGCCGCTGCGCGGCAATCTCGACACACGGCTGTCCAAGCTCGACCGCGGCGATTACGCGGCCATCATCCTCGCGGC CGCCGGGCTCAAGCGGCTGGGGCTGTCCGAGCGCATCCGCGCCGTCATCGCGCCCGAAACGTCCCTGCCGGCGGCGGGGC AGGGCGCGCTCGGCATCGAGAGCCGCGTCGATCGCCACGACGTGCAGGCCTGGCTCGCGCCGCTGCATCACGCGCCCACG GCGCTGGCCGTGACCGCCGAGCGCGCGGTGTCGCGCCAGCTGGGCGGCTCGTGCCAGGTGCCGCTGGCCGCGTTCGCGCA ATGGACCGATGCCGGCGCGCTGCGCCTGCGCGCCTTCGTCGCTTCGCCGGACGGCCGCCGCAAGCTTGCCGCCGAAGCCG AGGCCACGCCCGCCACACCGGCCGAGGCCGAGGCCCTGGGCGCCCGCGTCGCGCAGCAGATGCTGGACGGCGGCGCACAC GACATCCTCGCCACGCTGGGCGCCGACGCGCCGCCCGCCACCTGA Protein sequence : MSSNARPTSVESPLAAQAPTKLVIASRESRLAMWQAEYVRAALQKYYPACDVSILGMTTRGDQILDRSLAKVGGKGLFVK ELEVALAEGRADLAVHSLKDVPMELPPGFVLSAILEREDPRDAFVSNDYADLAALPAGAVVGTSSLRREASLRARFPHLV IQPLRGNLDTRLSKLDRGDYAAIILAAAGLKRLGLSERIRAVIAPETSLPAAGQGALGIESRVDRHDVQAWLAPLHHAPT ALAVTAERAVSRQLGGSCQVPLAAFAQWTDAGALRLRAFVASPDGRRKLAAEAEATPATPAEAEALGARVAQQMLDGGAH DILATLGADAPPAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 6e-58 | 54 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 6e-58 | 54 |
