Gene Information

Name : RSc2310 (RSc2310)
Accession : NP_520431.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Virulence
Product : GSPG-related transmembrane protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 2510819 - 2511286 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence : 
ATGATCGGGGTCTTGCGTTGCCCACGGGATGACGGCGGCAGCGTCTTCGCACGTCGATGCGCGCGCCGGGAAGGGGGCTT
TACGCTCCTGGAGCTCCTGGTCGTGATGGTCATCATCGGGTTGCTGGCGGGCCTGGTGGCGCCGCAGTATTTCGATCAGA
TCGGCAAGTCCAACCTCAAGATCGCGAAGGCGCAGATCGAGTCGCTCGGCAAGGCGCTTGATCAGTACCGCCTCGATGTC
GGCGCGTATCCGAGCACGGAGGAAGGCCTGGACGCGCTCAACACGCGGCCGCAGAGCCAGCCGCGGTGGAGCGGCCCCTA
TCTGAAGAAGGCGGTTCCGCTCGACCCGTGGGATCGCCCGTACGTCTACCGGTCGCCCGGCGAGCACGGCGAATACGACC
TGTACTCGCTGGGCAAGAGCGGGCAGCCCGGCGGCACCGGCGAGAACGTGGCGGTCACATCGTGGTGA

Protein sequence : 
MIGVLRCPRDDGGSVFARRCARREGGFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAKAQIESLGKALDQYRLDV
GAYPSTEEGLDALNTRPQSQPRWSGPYLKKAVPLDPWDRPYVYRSPGEHGEYDLYSLGKSGQPGGTGENVAVTSW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-25 44
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-25 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSc2310 NP_520431.1 GSPG-related transmembrane protein VFG0180 Protein 6e-29 45
RSc2310 NP_520431.1 GSPG-related transmembrane protein VFG2050 Protein 9e-26 44
RSc2310 NP_520431.1 GSPG-related transmembrane protein VFG1871 Protein 6e-25 43