Gene Information

Name : pcaI (RSc2254)
Accession : NP_520375.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : 3-oxoadipate CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : 2.8.3.6
Position : 2446514 - 2447203 bp
Length : 690 bp
Strand : -
Note : Product confidence : probable; Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
GTGATCAACAAGATTTGCCTGTCCGTGGAGGCCGCGCTGGCCGATATCCCGGACGGCGCCACCATCATGATCGGCGGGTT
CGGTACCGCCGGCATGCCCGCTGCGCTCATCGACGGGCTCATCGCCCACGGCGCGCGCGAGCTGACCATCATCAACAACA
ACGCCGGCAACGGCGAGACGGGCCTGGCGGCGCTGCTCAAGGCGCGGCGCGTGCGCAAGATCGTCTGCTCGTTCCCGCGC
CAGTCCGACTCGTACGTGTTCGACGCGCTCTACCGCGCCGGCGAGATCGAGCTGGAGCTCGTGCCGCAGGGCAACCTGGC
CGAGCGCATTCGCGCGGCGGGCGCCGGCATCGGCGGCTTTTTCTGCCCGACCGCCTACGGCACGCAACTGGCCGAAGGCA
AGGAGACGCGCATCATCGACGGCAAGCCCTACGTGTTCGAACTGCCGCTGACCGCCGACTACGCCCTCATCAAGGCCCTG
CGCGGTGATCGCTGGGGCAACCTGGTCTACCGCAAGACCGCGCGCAACTTCGGCCCCGTGATGGCGATGGCGGCCAAGTG
CACCATCGCCGAGGTCGATGCGACCGTCGAGCTGGGCGCGCTGGACCCGGAGCACATCGTCACGCCGGGCATCTTCGTCA
AGCGCATCGTGCCGGTCGGCGCCGCCGCGCAAACCAGGGAGGCCGCATGA

Protein sequence :
MINKICLSVEAALADIPDGATIMIGGFGTAGMPAALIDGLIAHGARELTIINNNAGNGETGLAALLKARRVRKIVCSFPR
QSDSYVFDALYRAGEIELELVPQGNLAERIRAAGAGIGGFFCPTAYGTQLAEGKETRIIDGKPYVFELPLTADYALIKAL
RGDRWGNLVYRKTARNFGPVMAMAAKCTIAEVDATVELGALDPEHIVTPGIFVKRIVPVGAAAQTREAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 2e-28 46