Gene Information

Name : rph (RSc2159)
Accession : NP_520280.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2342256 - 2342972 bp
Length : 717 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGACCCAGTGGCCGCCAGCCCGACCAACTCCGTCCCGTCACCCTCACCCGCCATTACACGCGCCACGCCGAAGGCTC
GGTGCTGGTGTGCTTCGGCGACACGCACGTGCTGTGCACGGCCAGCGTGCTGCCCAAGGTGCCGCCCCACAAGAAAGGCA
GCGGCGAAGGCTGGGTGACGGCCGAATACGGCATGCTGCCGCGCTCGACGCACACCCGCTCCGACCGCGAAGCGGCGCGC
GGCAAGCAGAGCGGCCGCACACAGGAAATCCAGCGGCTGATCGGCCGGGCGATGCGCTCGGTGTTCGATCTGTCCGCGCT
GGGCGAGCACACCATCCACCTGGACTGCGACGTGCTGCAGGCCGACGGCGGCACGCGCACGGCCAGCATCACCGGCGCCT
TCGTGGCGGCCCATGACGCGATCTCGGTGATGCGCAAGAAGGGCCAGTTGACCGGCGAGCCGATCCGCGACTTCGTTGCC
GCCGTGTCGGTGGGCGTGGTCGATGGCGTGCCGGTGCTCGATCTCGACTACCCCGAAGACGCGTCCTGCGACACCGACAT
GAACATCGTGATGACCGGCGCCGGCGGCTTCGTGGAAGTCCAGGGGACGGCCGAAGGAACGCCGTTCACGCGCACCGAGA
TGGACGCGCTGCTGGGCCTGGCCGACCACGGCATCCGCACGCTGATCGGCCTGCAGAAGCAGGCGCTCGGCCTGTGA

Protein sequence :
MRPSGRQPDQLRPVTLTRHYTRHAEGSVLVCFGDTHVLCTASVLPKVPPHKKGSGEGWVTAEYGMLPRSTHTRSDREAAR
GKQSGRTQEIQRLIGRAMRSVFDLSALGEHTIHLDCDVLQADGGTRTASITGAFVAAHDAISVMRKKGQLTGEPIRDFVA
AVSVGVVDGVPVLDLDYPEDASCDTDMNIVMTGAGGFVEVQGTAEGTPFTRTEMDALLGLADHGIRTLIGLQKQALGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-56 58