|
Name : RSc1941 (RSc1941) Accession : NP_520062.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : bacteriophage protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2114488 - 2115573 bp Length : 1086 bp Strand : + Note : - DNA sequence : ATGAGCCGCAACAAGACCCGCCGCGCCGCGCGCACGGCATCCGCCCACGTGCGCACCGCCAACACCGACGCACCGACCGA GCGCCACACCGACCGGGCCGCGCAGGCCGAGGTGTTCTCTTTCGGCGATCCGGTCGAAGTGTTGGACCGGCGCGAGCTGC TGGATTACGTCGAGTGCATGCGCATGGGCCAGTGGTATGAACCGCCGCTGCCGTGGGACGGCCTGGCGCGCTCGTTCCGC GCCGCCGCACACCACAGCTCGGCCATCTACGTGAAGCGCAATATCCTGGTCAGCACGTTCATCCCGCACCGCCTACTCTC GCGCGCGACGTTCGAGCGCCTGGTGCTCGACTGGCAGGTATTCGGCAATGCCTACCTGGAGCGCCGCGACAACGTGCTCG GCCGCCCGATGCGGCTGGATACGCCCCTGGCCAAGTACGTGCGGCGCGGGCTCGACCTGAACACCTATTTTTTCGTGCAG AACTGGCAGCAGCCATACACCTTCGCCGCCGGCTCCATGTTCCACCTCCAGGAACCGGACATCAATCAAGAGGTGTACGG CCTGCCGGAATACCTGTCCGCGCTGAACGCCACATGGTTGAACGAATCGGCCACGCTGTTCCGCCGCCGGTACTACAAAA ATGGCTCCCACGCCGGCTTCATCCTCTACATGACCGACGCGGCGCAGAGGCAAGAGGATGTCGACACGCTGCGCGAGGCG ATGAAGAGTGCCAAGGGGCCGGGCAATTTCCGCAACCTGTTCATGTACGCGCCTAACGGCAAGAAGGACGGGATCCAGCT GCTACCGGTGTCCGAGGTGGCCGCGAAGGACGAGTTCTGGAACATCAAAAACGTCACGCGCGACGACCAGCTCGCCGCGC ACCGCGTGCCGCCGCAGCTCATGGGCATCATCCCGAACAACACCGGCGGATTCGGCGACGTGGAGAAGGCCGCCCTGGTG TTCGCGCGCAACGAGGTGAAGCCATTGCAGGACCGCCTGTTGGCGGTCAATGACTGGATCGGGGAGGAGGTGGTGCGGTT CGCGCCATATGCACTGGGTGCAGCCGGCCAAGCGGATGCGCCATAG Protein sequence : MSRNKTRRAARTASAHVRTANTDAPTERHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPLPWDGLARSFR AAAHHSSAIYVKRNILVSTFIPHRLLSRATFERLVLDWQVFGNAYLERRDNVLGRPMRLDTPLAKYVRRGLDLNTYFFVQ NWQQPYTFAAGSMFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQRQEDVDTLREA MKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGFGDVEKAALV FARNEVKPLQDRLLAVNDWIGEEVVRFAPYALGAAGQADAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-109 | 68 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-109 | 68 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-92 | 57 |
