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Name : RSc1939 (RSc1939) Accession : NP_520060.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : terminase (ATPase) related protein Function : - COG functional category : S : Function unknown COG ID : COG5484 EC number : 3.6.1.- Position : 2112711 - 2114231 bp Length : 1521 bp Strand : + Note : - DNA sequence : ATGACTACGCTTCCGCCTCTCACCTCGCTATCGATCGACCCCGAAAAGGACCCGCGCCGCATCGCGCGCACGCTGTACTG GCAGGGCTACCGCGTCGCGCGCATCGCCGAAATGCTGGGCGTCAAGCCTGTAACGGTGCACAGCTGGAAGCGCCGCGATG GGTGGGATGCGACGGATGCGGTGGAGCGCGTGGCGTCCAGCATCGAAGAGCGCATGGCGCAGCTCGTCGCCAAAGAAGTG AAGGAAGGCCGGGACTACAAGGAAATCGACCTGCTCGGCCGACAGATGGAGCGCATGGCGCGCGTGCGCCGGTACGAGGC CAGCGGCAACGAAACCGACCTGAACCCGAAGGTCGCGAACCGCAACAAGGGGCCGCGCAGCAAGCTCGAGCGCAACGCGA TCAGCCCTGAGGAACAGACGCAGCTCCTGAAGGCCTTCCGCGACTCGATGTTCGATTACCAGCGTGTCTGGTACGAGGCG GGGCAGGTCGAGCGCATCCGCAACCTGCTGAAGTCGCGGCAGATCGGCGCCACGTGGTACTTCGCACGCGAGGCGTTCAT CGACGCGCTGACCACCGGCGGCAACCAGATTTTTCTATCGGCCAGCAAGGCACAGGCGCACGTCTTCAAGCAGTACATCG TCCAGTTCGCCAAGGACGCGGCCGGCGTCGAGCTGAAGGGCGACCCGATGGTGCTGCCCAACGGGGCCACGCTCTACTTC CTCGGGACCAACGCCCGCACCGCGCAGAGCTACCACGGCAACCTGTACTTCGATGAGTACTTCTGGGTGCCGCGCTTCCA GGAGCTGCGCAAGGTCGCGTCCGGCATGGCAATCCACAAGCACTGGCGGCAGACGTATTTCTCCACGCCGTCCAGCTTGT CGCATGAGGCCTACCCGTTCTGGTCCGGCGCACTGTTCAACCGCGGCAAGGCCAAGGACAAACAGATCAAGCTCGACGTA AGCCACGCCGCGCTGCGCGACGGCCTGCGCTGCGCGGATGGCCAATGGCGGCAGATTGTGACGGTGGAGGACGCGCTACG CGGCGGCTGCAACCTGTTCGACCTCGACCAGCTGCGCCTGGAGTACAGCGAACCCGAATTCGCGAACCTGCTCATGTGCG CCTTCATCGATGACAACGCGTCGGTGTTCCCGCTCTCGATGCTCATGCGCGGGATGGTGGACAGCTGGGAGGCCTGGGAG GACTTCCGGCCGTTCGCGCCACGGCCGTTCGGCAACCGGCCAGTGTGGGTCGGCTACGACCCCAACGGCGGCGGCGGCGA CAGCGCCGCGCTGGTGGTGGTCGCGCCGCCCCTGGTGCCGGGCGGCAAGTTCCGCGTGCTGGAGCGGCACCAGTTCCGCG GCATCGACTACGAGGAACAGGCCGGCGCCATCCGCCGCGTGTGCGAGCGCTTCAACGTGGCCTATGTCGGCATCGACCGC ACCGGCATCGGCGATGCGGTGTTCCGCCTGGTGCAGAAGTTCCGCCCGGACGCCGAAGTTTCACCTATTCCGTGGACGTG A Protein sequence : MTTLPPLTSLSIDPEKDPRRIARTLYWQGYRVARIAEMLGVKPVTVHSWKRRDGWDATDAVERVASSIEERMAQLVAKEV KEGRDYKEIDLLGRQMERMARVRRYEASGNETDLNPKVANRNKGPRSKLERNAISPEEQTQLLKAFRDSMFDYQRVWYEA GQVERIRNLLKSRQIGATWYFAREAFIDALTTGGNQIFLSASKAQAHVFKQYIVQFAKDAAGVELKGDPMVLPNGATLYF LGTNARTAQSYHGNLYFDEYFWVPRFQELRKVASGMAIHKHWRQTYFSTPSSLSHEAYPFWSGALFNRGKAKDKQIKLDV SHAALRDGLRCADGQWRQIVTVEDALRGGCNLFDLDQLRLEYSEPEFANLLMCAFIDDNASVFPLSMLMRGMVDSWEAWE DFRPFAPRPFGNRPVWVGYDPNGGGGDSAALVVVAPPLVPGGKFRVLERHQFRGIDYEEQAGAIRRVCERFNVAYVGIDR TGIGDAVFRLVQKFRPDAEVSPIPWT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4322 | NP_807916.1 | terminase subunit | Not tested | SPI-7 | Protein | 7e-156 | 68 |
| STY4627 | NP_458709.1 | probable terminase subunit | Not tested | SPI-7 | Protein | 5e-156 | 68 |
| unnamed | ABR13464.1 | predicted ATPase terminase subunit | Not tested | PAGI-6 | Protein | 1e-142 | 62 |
