Gene Information

Name : RSc1938 (RSc1938)
Accession : NP_520059.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : bacteriophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2111730 - 2112569 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAAGGGCACCAAGTTCTACCGCGTCGCCACCGAAGGCGCAACGAGCGACGGTCGCGTGATCGACCGCGAAACGCT
GGTCGAGATTGCAACCAACTATGACCCCAAGGTCTACACCGCGCGCGTCAACCTGGAGCACATCCGAGGCTACGACCCGA
CCGGCCCGTTCAAGGCCTACGGCGACGTGACCGCACTGAAGACCGAGGAGGAGGGCGGCAAGCTCGGCCTGTATGCGCAG
ATCGACCCCACGGACGATCTGGTTGCCATGACCAAGGCTCGCCAGAAAATCTTTGCCTCTATGGAGTTGAACCCGAGCTT
CGCCGACACCGGCGAGGCCTACCTGGTCGGCCTCGCCGTGACCGACAACCCGGCAAGCCTGGGATGCGAAGTCCTGCAGT
TCAGTGCCAAGGCCAAGACCAACCCGCTCGCCGCACGCAAGCAGAACCCGGACAACCTGTTCACCGAAGCCGTGGAGGTG
TCGTTCGACTTCTCGCCCGAGGTGACGAACTACACGGCAACGACCGTGCCCACGAACTTCGCCGACAGCATCAAGCGCCT
GTTCTCCAAGCAGCGCCGGTCGGACACCAACGCGGACGCCCGCTTCGCCGACATGCAGGAGGCCGTGCAGACGGTCGCCC
AGCAGGTGCAGGCCACCGGCGAACAGTTCAGTACCGCGCTCAAGGCCGTCACCGACCAGCTGAGCGCCATGAACAGCCAA
GGCGCGGAGCGCGACAAGCAGTTCAACGCCATGAAGGCCCAGCTGGAGAAGACCGACGCCTACGCCGCCCGCCCGCCGGC
CACGGGCGGCGCCGGCGCACCCATCACGACCGATTGCTGA

Protein sequence :
MAKGTKFYRVATEGATSDGRVIDRETLVEIATNYDPKVYTARVNLEHIRGYDPTGPFKAYGDVTALKTEEEGGKLGLYAQ
IDPTDDLVAMTKARQKIFASMELNPSFADTGEAYLVGLAVTDNPASLGCEVLQFSAKAKTNPLAARKQNPDNLFTEAVEV
SFDFSPEVTNYTATTVPTNFADSIKRLFSKQRRSDTNADARFADMQEAVQTVAQQVQATGEQFSTALKAVTDQLSAMNSQ
GAERDKQFNAMKAQLEKTDAYAARPPATGGAGAPITTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 9e-48 47
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 9e-48 47