Gene Information

Name : RSc1937 (RSc1937)
Accession : NP_520058.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : bacteriophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2110660 - 2111676 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence :
ATGCGCAACGAAACCCGCCGCCTCTTCACGGCTTACAAGGACGCAATCGCCAAGCTCAACGGCGTGGCTCGCGTTGATGA
GAAGTTCAGCGTCGCGCCGAGCGTCCAGCAGAAGCTGGAGACCAAGGTTCAGGAGTCGAGCGATTTCCTGACCCGCATCA
ACTTCTATGGCGTGCCCGAACAGGAAGCCGAAAAGATCGGCCTGGGCGTGTCGGGCCCGGTGGCAAGCAACACCGACACC
ACCCAGCAGGACCGGCAGACCTCCGACATTGCCACGCTGGACGGCCGCCGCTACCGGTGCGAGCAGACCAACTCCGACAC
GCACATCACCTACCAGAGGCTGGACGCCTGGGCCAAGTTCCCCGACTTCCAGACCCGGATCCGCGACGCCATCATCAAGC
GCCAGGCGCTGGATCGCATCATGATCGGCTTCAACGGTGTCAGCCGAGCCGCCACGTCCAATCGGGTGGTCAACCCGATG
CTCCAGGACGTGAACAAAGGCTGGCTGCAGAACCTGCGCGAACAGGCGCCGCAGCGCGTCATGGAGGAAGGCAAAAAAGC
GGCCGGCAAGATCATCGTCGGCGCGGGTGGGGACTACGGCAACCTGGACGCCCTGGTGTTCGACGTCGTGAACCAGCTGG
TCGAGCCGTGGTACGCCGAGGATCCGGAGCTGGTCGTGCTGTGTGGTCGCAACCTGCTGGCCGACAAGTACTTCCCGCTG
GTGAACAAAGACCGCGACCCGGTCCAGCAGATCGCGGCCGACCTCATCATCAGCCAGAAGCGCATCGGCAACCTGCAGGC
GGTGCGCGTGCCGTACTTCCCGGCGAATGGCCTGCTGGTGACGCGCCTGGACAACCTGTCCATCTACTACCAGGAGAACG
CGCGCCGTCGCACGATCCTGGACAACGCGAAGCGCGATCGCATCGAGAACTACGAGTCGAGCAACGACGCGTACGTGATC
GAAGACCTGGCGTGCGCAGCCATGGCCGAGAACATCGAACTGGCGGCGGCAGCATGA

Protein sequence :
MRNETRRLFTAYKDAIAKLNGVARVDEKFSVAPSVQQKLETKVQESSDFLTRINFYGVPEQEAEKIGLGVSGPVASNTDT
TQQDRQTSDIATLDGRRYRCEQTNSDTHITYQRLDAWAKFPDFQTRIRDAIIKRQALDRIMIGFNGVSRAATSNRVVNPM
LQDVNKGWLQNLREQAPQRVMEEGKKAAGKIIVGAGGDYGNLDALVFDVVNQLVEPWYAEDPELVVLCGRNLLADKYFPL
VNKDRDPVQQIAADLIISQKRIGNLQAVRVPYFPANGLLVTRLDNLSIYYQENARRRTILDNAKRDRIENYESSNDAYVI
EDLACAAMAENIELAAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 7e-86 61
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 7e-86 61
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 6e-81 59