Gene Information

Name : RSc1935 (RSc1935)
Accession : NP_520056.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : bacteriophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2109365 - 2109844 bp
Length : 480 bp
Strand : -
Note : -

DNA sequence :
ATGTCCTCATTCATCGCAGCAGCACCCGTACCGACGCCGGCGCAACCCGGCGGGCAGCCGATCGGCAACGACGGCTTTTT
CCCGGACATCGACGTCGACCAGGCCTGCGCCGCCATGCGCCTGGACGGCACCGTCACGCCCGAACGCCTGCGCGCCGCGC
TGGTCGACGCCGCGCTGTCCGTCAACGATGAACTGGCGGCATGGAAGGCGCAGCAGCTTGCCGCCGGATTCACGGAGCTG
GGCGCAGTGCCGGGGCAGTGGATCGACGGCCGGAGCCGCCACGTGCACCGCTACCTGCGCGCGGTCCACTGCACGGCGGC
GGCCTGGCTGATGGAGCGGTACCGGTCGTTCGACGCCACCGCCGCGGGGGACCGCAAGGCCGAGGCGGAAAACACCTCGG
TGGATGATCTGCGCCGCGATGCGCGCTGGGCAGTCAGCGACATCACCGGCGCAGCGCGCACCACCGTGGAGCTGATCTGA

Protein sequence :
MSSFIAAAPVPTPAQPGGQPIGNDGFFPDIDVDQACAAMRLDGTVTPERLRAALVDAALSVNDELAAWKAQQLAAGFTEL
GAVPGQWIDGRSRHVHRYLRAVHCTAAAWLMERYRSFDATAAGDRKAEAENTSVDDLRRDARWAVSDITGAARTTVELI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13468.1 predicted capsid completion protein Not tested PAGI-6 Protein 6e-28 45
t4317 NP_807912.1 capsid completion protein Not tested SPI-7 Protein 5e-19 41
STY4623 NP_458705.1 putative capsid completion protein Not tested SPI-7 Protein 4e-19 41