Gene Information

Name : RSc1923 (RSc1923)
Accession : NP_520044.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : baseplate assembly-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 2102872 - 2103780 bp
Length : 909 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCATCATCGACCTGTCGCAGCTGCCGGCGCCGGCCGTGGTCGAAACGCTCGACTACGAAGCCATCCTGGCCGAGCG
GAAAGACTACTTTGTGTCGCTGCACCCAGCCGACCAGCGGGACGCCGCGCGCGCCACGCTGGAGCTGGAATCCGAGCCGA
TCACCAAGCTCTTGCAGGAGAACGCCTACCGCGAGCTGGTGTGGCGCCAGCGCGTGAACGACGCGGCGCGTGGGGTCATG
CTGGCCTTCGCGGAAGGGGACGACCTAGAGCAGATCGCGGCGAACTTCAACGTGGGGCGCCTGACCATCACGCCGGCCGA
CGACACCACCGTGCCGCCGACGCCCGCTGTGATGGAGGGCGACGACTCGCTGCGCGAGCGCGCACAGGAAGCGTTTGAAG
GGCTGTCCGTGGCTGGCCCGACCAAGGCCTACGAGCAGTTCGCGCGCTCGGCTGACGGCCGGGTGGCGGACGCGCGCGCG
ATCAGCCCGGCCGGCGCGGAAGTGGTGGTCTCGGTGCTGTCGCACCTGAACGACGGCACGGCCGACGAGAGCCTGCTGAC
GGCTGTACGCACCGCGTTGAGCGATGACGACACCCGGCCGCTCGGCGACCGCCTGACGGTGCAATCCGCCACCATCGTCC
CGTACCGCATCCGTGCCACGCTGTACCTGGCATCGGGACCGGCGGCCGAGCCGATCCTGGACGCGGCTGGCAAGCGGGCC
GACACCTACCGCACCACGCGCCGGCGCATCGGCCGCGACATCAACCGCTCGGCGATCACGGCGGCACTGCATGTGGAAGG
CGTGGAGAAGGTCGTGCTGATCGAGCCGGCCGCAGACATCGCGCTCGATCTGACCCAGGCGGGCTACTGCACCGCCGTGG
AGATCGTCAATGGTGGCACCAGTGAGTAG

Protein sequence : 
MAIIDLSQLPAPAVVETLDYEAILAERKDYFVSLHPADQRDAARATLELESEPITKLLQENAYRELVWRQRVNDAARGVM
LAFAEGDDLEQIAANFNVGRLTITPADDTTVPPTPAVMEGDDSLRERAQEAFEGLSVAGPTKAYEQFARSADGRVADARA
ISPAGAEVVVSVLSHLNDGTADESLLTAVRTALSDDDTRPLGDRLTVQSATIVPYRIRATLYLASGPAAEPILDAAGKRA
DTYRTTRRRIGRDINRSAITAALHVEGVEKVVLIEPAADIALDLTQAGYCTAVEIVNGGTSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 3e-75 60
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 3e-75 60
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 2e-62 58