Gene Information

Name : RSc1918 (RSc1918)
Accession : NP_520039.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : phage tail sheath-like protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 2098096 - 2099271 bp
Length : 1176 bp
Strand : -
Note : -

DNA sequence :
ATGCCAACCGACTACCACCACGGCGTGCGCGTCGTTGAACTCAACGACGGCACGCGCCCCATCCGCACCATCGAGACCGC
CGTGGCCGGCATCGTCTGCACCGCCGACGATGCCGATGCGGTTGCGTTCCCGCTCGACACGCCCGTCCTGCTGACCAACC
CGCAGGCCTACATCGGCAAGGCCGGCGACAAAGGCACGCTCGCCCGCACGCTCGACGCCATCACCGACCAGACCAACCCG
CTCACGGTCGTGGTGCGCGTCGCCGGTGGCGCTTCCGAAGCCGAGACCACCTCCAACCTGATCGGCACCACCACGGCGGC
CGGTCGGTACACCGGCCTGAAGGCGCTGCTGTCCGCACGCAACCGCTTCGGCGTCACACCGCGCATCCTAGCCGTCCCGG
GCCTCGACAGCCTGCCCGTGGCCGCTGAGCTGGCAACCATCGCCCAGAAGCTGCGCGCTTTCGCCTACCTGTCGGCGTAC
GGCTGCCAGACGAAGGAAGAGGCCGTCGTCTACCGCAGCAACTTCGGCCAGCGCGAAGCGATGGTGATCTGGCCGGATTT
CGTCGGCTGGGATACTGCCGCCAACGCCGAGACCACCCTGTGGGCCACGGCCCGGGCGGTCGGCCTGCGCGCCAAGATCG
ACAACGACACCGGCTGGCACAAGACCCTTTCCAACGTGACCGTGGGCGGCGTGACCGGCCTGTCGCGCGACGTGTTCTGG
GACCTTCAGGACCCGGCTACCGACGCGGGCTACCTGAACGCCAACGAGGTGACCACGCTGGTTCACCGGGACGGCTTCCG
CTTCTGGGGCTCCCGCACGTGCAGCGCGGATCCGCTGTTCGCCTTCGAGAACTACACACGCACCGCCCAAGTGCTGGCTG
ACACCATGGCGGAAGCCCACATGTGGGCAAACGATCTGCCGATGACGCCGACGCTGGTGCGCGATCTGTTGGAGGGCATC
AACGCCAAGCTGCGCATGCTGACCCGCAACGGCTACCTGCTGGGCGGCGCCGCATGGTTCGACCCGGAAGCCAACACCAA
GGACACGCTGAAGGCCGGCCAACTCGCCATCGACTACGACTACACGCCCGTCCCGCCGCTGGAAGACCTCACGTTCCGCC
AGCGCATCACCGACCGCTACCTGATGCAGTTCGCCGAAGCCGTCAAGGCGGCTTGA

Protein sequence :
MPTDYHHGVRVVELNDGTRPIRTIETAVAGIVCTADDADAVAFPLDTPVLLTNPQAYIGKAGDKGTLARTLDAITDQTNP
LTVVVRVAGGASEAETTSNLIGTTTAAGRYTGLKALLSARNRFGVTPRILAVPGLDSLPVAAELATIAQKLRAFAYLSAY
GCQTKEEAVVYRSNFGQREAMVIWPDFVGWDTAANAETTLWATARAVGLRAKIDNDTGWHKTLSNVTVGGVTGLSRDVFW
DLQDPATDAGYLNANEVTTLVHRDGFRFWGSRTCSADPLFAFENYTRTAQVLADTMAEAHMWANDLPMTPTLVRDLLEGI
NAKLRMLTRNGYLLGGAAWFDPEANTKDTLKAGQLAIDYDYTPVPPLEDLTFRQRITDRYLMQFAEAVKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 2e-125 69
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 3e-129 68
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 3e-129 68