|
Name : RSc1898 (RSc1898) Accession : NP_520019.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : phage-like protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0358 EC number : - Position : 2086024 - 2088732 bp Length : 2709 bp Strand : - Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by FrameD DNA sequence : ATGAACGCAACCCTTGCCGCCGACATCGTTTTCCGCCTGTTGCGCGACTACGATTTCAAGGAGCGCAACAACAAGCTGGA GGGTGGGCAATGCCCGTCCTGCGGCAAGCGCTCGCTGTGGGCCTTCTCCGCCACCCCCTGGGTCGTCCGCTGCAACCGCC TCAACAAATGTGCGTCCGAGCTGCACGTCAAAGAGCTGTATCCCGAGCTGTTCGCTTCGTGGAGCGACCGCTATGTGCGT TCGCCAGAAACGCCCAACGCTGCTGCGGATGCCTACCTGCGCGACGCCCGTGGCTTTGATCTGGCACGCATTGCCGGCTG GTACGTGCAGGAGAGCTACTACAGCCACGAGCTGAAGATTGGCAGCGCGACAGTACGCTTCCCGCTGGCTGCCGGAACGT ACTGGGAGCGCATCATCGACCAGCCTGAACGGTTCGGCGACCGTAAGGCCACCTTCTGCGGGCAGTATGGCGGCACCTGG TGGCAGCCGCCCAACCTGTCATCCGAGGCCGGCGAACTGTGGCTGGTGGAGGGCATCTTTGATGCGATCGCGCTCCTGCA TCACGGTATCGCCGCCGCAGCCTTGCTTTCGTGCGTCAACTATCCGCGCGCTGCGCTGGCCGCTTTGGCAGAGCAGTGCG CGGCTACCGGTCGGTCCCGCCCGCGTCTTGTCTGGGCGCTTGACGATGACCGTGCGGGGCGCCGTTACATGGCCCAGCAC ATCGAGCGCGCCAGGGCAGACGGTTGGGCCGCCTCCGCCGCGCTGCCCAAGCAGATGGGCAAGGTCAAAATGGATTGGAA CGAGCTGCATCTACGTGACCGGCTGTCGCCGCAACACGTGGAGGAATATCGCTATCTGGGCGACCTGTTCACCGCTGCCA GCCCATCCGAGAAGGCTCGCCTGATCTACCACCGCACGGGCGACGCGCAATTCCCGTTCGACTACCGGCAACGGTCGTAC TGGTTCAAGCTGGAGCTGGACGCCTTCCAGCGCGAAACCGCCGCGGTGCGCGAAGCCCACCCGGACATGCCCGACGGCGA AGTGCGCGAGCACGCCGTGCTGCGCGCCGGCGTGGTGCAGATGGTCGCCAACTGTCAGCCCACCGCGCTCTACTACCAGG CCAGCCCGCAAACCGACGAGTCCTGGTACTACTTCCGCGTGGCCTTTCCGCACGATGGCGAGCCGATCAAGGCGACCTTC ACCAGTGCGCAGATCGCCAGCAGTAGCGAGTTCAAGAAGCGCCTGCTGGGCGTGGCGCCGGGTGCCATGTATACCGGCAC GGGCACCCAGCTCGACGGCTACCTCGCACGCCAGCTCGCGCGCATCCCGACCGTGCAGACCGTCGATTACATGGGCTACA GCAAAGAGCACGGCTGCTACGTCTACGGCGATGTCGCCGTCAAGGACGGCCGGCTGTACCGCCTCAATGACGAGGATTTT TTCGACATCGGCAAGCTGGCGATCAAGACGATCAGCCAGTCCGCTACCCTGACTCTCAACGCCGATGGCAAGGCGGCACC GGCCGACTGGCTGCCGCTGCTGTGGCAAGCCTTCGGCGCCAAGGGCTTGGTGGCGCTCGCCTTTTGGTTCGGGAGCCTAT TCGCGGAGCAGATCCGCCAGTCGCACAAGAGCTATCCATTCCTGGAGCTGGTCGGCGAGCCTGGGGCCGGTAAGACTACG CTGATTGAATTTCTCTGGAAGCTGTGCGGCCGACGCGATTACGAGGGCTTCGACCCCAGCAAGTCGTCCCTGGCGGCGCG CGCGCGGAACTTCGCGCAGGTGTCCAACCTTCCGGTGGTGCTGATCGAGGCGGACCGGGGCGAGGAGGGGGCCAAGCAGC GCGGCTTCGACTGGGACGAACTGAAGACGGCCTACAACGGCCGCAGCACCCGCGCACGTGGCGTCAAGAACGGCGGGAAC GAAACCTACGAACCCCCTTTCAGGGGCGCCATCGTCATCAGCCAGAACGCGGAAGTGAGCGCGAGCGATGCGGTACTTCA GCGCATCGTGCACATCTACTGCGACCGGTCCGCCCAGACGCCGGCAACGCGCGCCGCCGCCGAGGCTCTGGAGCGCATCG CCATCGAGGAGGTGTCCGGTTTTCTTCTGGCGGCCGTGATGGCGGAGAAGCAAGTGCTGGCAACCTTCGACGCTCGCGTG TCTCAGCACGAGAACGCCCTGTTAGCGCGCGCTGATGTGAAAACGGTGCGCCTTGCGAAGAACCACGCCCAGATCATGGC GATGGTCGATGCTCTGCGCCTGGTCTTGCCACTGACCGACGAGCAGCACGCCGCCGGCTTGGCCGAACTGGGGCGCATGG TCGCCGCGCGTCAGCAGGCCATCAGCGCGGACCACAAGCATGTCCAGCAGTTTTGGGAGGTCTACGACTTCATTGAGTCG GCCGACGACGATCGGCCGATCCTCAACCACGCGCGCGGGGCCGGCCTGGTTGCAATCAACCTGCAGCACATGGCACAGGC CGCAGGCGAGCGGCGTATCGAGCTGCCGCCCATCGAGGACCTCAAGCGCGTGCTGAAGACCTCGCGCCAGCGCAAGTTTG TGGACATCCGCGCCGTCAACAGCGCCATCAATGCCTATCACAACCGCGAACACCTGCATCTGCCCAAGCGGCCGGAGACG GTCAAGTGCTGGGTGTTCGAGTCAGGATCAACAAAGCAACGCAACAACAACAACGGAAGCGCCGCATGA Protein sequence : MNATLAADIVFRLLRDYDFKERNNKLEGGQCPSCGKRSLWAFSATPWVVRCNRLNKCASELHVKELYPELFASWSDRYVR SPETPNAAADAYLRDARGFDLARIAGWYVQESYYSHELKIGSATVRFPLAAGTYWERIIDQPERFGDRKATFCGQYGGTW WQPPNLSSEAGELWLVEGIFDAIALLHHGIAAAALLSCVNYPRAALAALAEQCAATGRSRPRLVWALDDDRAGRRYMAQH IERARADGWAASAALPKQMGKVKMDWNELHLRDRLSPQHVEEYRYLGDLFTAASPSEKARLIYHRTGDAQFPFDYRQRSY WFKLELDAFQRETAAVREAHPDMPDGEVREHAVLRAGVVQMVANCQPTALYYQASPQTDESWYYFRVAFPHDGEPIKATF TSAQIASSSEFKKRLLGVAPGAMYTGTGTQLDGYLARQLARIPTVQTVDYMGYSKEHGCYVYGDVAVKDGRLYRLNDEDF FDIGKLAIKTISQSATLTLNADGKAAPADWLPLLWQAFGAKGLVALAFWFGSLFAEQIRQSHKSYPFLELVGEPGAGKTT LIEFLWKLCGRRDYEGFDPSKSSLAARARNFAQVSNLPVVLIEADRGEEGAKQRGFDWDELKTAYNGRSTRARGVKNGGN ETYEPPFRGAIVISQNAEVSASDAVLQRIVHIYCDRSAQTPATRAAAEALERIAIEEVSGFLLAAVMAEKQVLATFDARV SQHENALLARADVKTVRLAKNHAQIMAMVDALRLVLPLTDEQHAAGLAELGRMVAARQQAISADHKHVQQFWEVYDFIES ADDDRPILNHARGAGLVAINLQHMAQAAGERRIELPPIEDLKRVLKTSRQRKFVDIRAVNSAINAYHNREHLHLPKRPET VKCWVFESGSTKQRNNNNGSAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13498.1 | hypothetical protein | Not tested | PAGI-6 | Protein | 0.0 | 48 |
