Gene Information

Name : RSc1897 (RSc1897)
Accession : NP_520018.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 2085812 - 2086027 bp
Length : 216 bp
Strand : -
Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGAAAGCCATCAATATCAAGCAAGTCGCCGAGAAGGTTTCCCTCGGCCAATCTACGATCTATCGCATGATCACCAAGGG
CGAGTTTCCCAAGCCGTTCTCGCTCGGCGGCAACCGTACCGCCTGGCTGGACGAAGACATCGACGCCTGGCTTGCCATGA
GGGCCGGCAGGCCAATACCAAAGCCGGGCGTCACGCTGCTGAAGCCTCTCGCTTGA

Protein sequence :
MKAINIKQVAEKVSLGQSTIYRMITKGEFPKPFSLGGNRTAWLDEDIDAWLAMRAGRPIPKPGVTLLKPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-08 41
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-08 41
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSc1897 NP_520018.1 hypothetical protein VFG1118 Protein 4e-09 41