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Name : tISRso10b (RSc1830) Accession : NP_519951.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : ISRSO10-transposase ORFB protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2001545 - 2002393 bp Length : 849 bp Strand : - Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : GTGAAGCTAGTTTGCGAGGTCCTCGGCGTAGCGCGCTCAAACGTGGCGGCCAAGCGGGCCCGGCCGGGTGATTGGCGCGA CGGGCGCACAGCTCGGCAAACCGACGACGCTAGCTTGGTCGACGAAATCCGGCGCACCATCGCCGACTTGCCGAGCTATG GCTACCGGCGGGTCTGGGGCAGATTGCGGCGCGAACGTGAGCGTCAATGCGAAGCGCCGATCAATGCCAAGCGTGTCTAT CGGGTCATGCGTGTGCACAGCTTGCTGCTTGAGCGCAGGCCGACGCCACCGCGTCCACCGCGCCGGCATGACGGCAAGGT CGCCGTGGCCAAGAGCAACCAGCGCTGGTGCTCCGATGGCTTCGAGTTCCGCTGCGACAACGGCGAGCCGCTGCGGGTGA CGTTCGCGCTGGATTGCTGCGACCGCGAGGCGATGAGCTGGGTGGCGACGACCGGCGGCTACAGCGGCGACGTAGTACGC GACGTGATGCTGGCGGCCGTCGAGCAGCGCTTCGGCAATGTTCCGAAAGCGCCAGCGGAAATTGAATGGCTGACGGACAA CGGCTCAGGCTACATTGCTGGGAAGACTCGCGAGTTCGCCACGGACATTGGCTTGAAGCCATTGACGACACCGGTTTGCA GCCCGCAGAGCAACGGCATGGCCGAGAGCTTCGTGAAGACGATGAAGCGCGACTACGTCGCCTTCATGCCCAAGCCTGAC GCGGCCACAGCGACGCGCAACCTCGCCATCGCGTTCGAGCATTACAACGAGCAGCATCCCCATAGCGCACTGAAATATCG CTCGCCACGCGAGTTCAGGCGCAGGACGGAATCATCAACTCAAGTGTGA Protein sequence : MKLVCEVLGVARSNVAAKRARPGDWRDGRTARQTDDASLVDEIRRTIADLPSYGYRRVWGRLRRERERQCEAPINAKRVY RVMRVHSLLLERRPTPPRPPRRHDGKVAVAKSNQRWCSDGFEFRCDNGEPLRVTFALDCCDREAMSWVATTGGYSGDVVR DVMLAAVEQRFGNVPKAPAEIEWLTDNGSGYIAGKTREFATDIGLKPLTTPVCSPQSNGMAESFVKTMKRDYVAFMPKPD AATATRNLAIAFEHYNEQHPHSALKYRSPREFRRRTESSTQV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 7e-68 | 64 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 4e-66 | 64 |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 3e-66 | 64 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 9e-65 | 64 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 8e-69 | 62 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 5e-71 | 62 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 8e-70 | 61 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 8e-70 | 61 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 8e-70 | 61 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 6e-70 | 61 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 5e-70 | 61 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 4e-69 | 60 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 8e-65 | 56 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 6e-40 | 54 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 1e-41 | 52 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 8e-42 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tISRso10b | NP_519951.1 | ISRSO10-transposase ORFB protein | VFG0649 | Protein | 4e-65 | 64 |
| tISRso10b | NP_519951.1 | ISRSO10-transposase ORFB protein | VFG0608 | Protein | 3e-70 | 61 |
| tISRso10b | NP_519951.1 | ISRSO10-transposase ORFB protein | VFG1732 | Protein | 2e-70 | 61 |
| tISRso10b | NP_519951.1 | ISRSO10-transposase ORFB protein | VFG0621 | Protein | 3e-70 | 61 |
