|
Name : lpsI (RSc1570) Accession : NP_519691.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : fesuccinyl-CoA:3-ketoacid-coenzyme A transferase subunit A protein Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1788 EC number : 2.8.3.5 Position : 1686234 - 1686932 bp Length : 699 bp Strand : + Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAACAAAATCTACGCCAGCGCCGCCGAGGCGCTCGCGGGTATCGTCAAGGACGGCCAGACCATCGCCGTGGGCGGCTT CGGCCTGTGCGGCATCCCGGAGGCGCTGATCGGCGCGCTGCGCGATTCCGGTGCCAAGGGGCTCACCTGCATTTCCAACA ACGCCGGCGTCGACGGCTTCGGCCTGGGGCGGCTGCTGGAAACCCGCCAGATCAAGAAGATGATCTCGTCCTACGTGGGC GAGAACAAGGAGTTCGAGCGCCAGTACCTGTCCGGCGAGCTCGAGCTGGAATTCACCCCGCAGGGCACGCTGGCCGAGAA GCTGCGCGCCGGCGGCGCCGGCATCCCGGCATTCTTCACCCGCACCGGCGTCGGCACCGTGGTGGCCGACGGCAAGGAGG TGCGCGAATTCGACGGCGAGCAGTACGTCATGGAGCGCTCCCTGATCGCCGACGTGGCCCTGGTCAAGGCGTGGAAGGCC GACAAGTCCGGCAACCTGAAGTACCACCGCACCGCGCGCAACTTCAACCCGATGTGTGCCATGGCCGGCCGCATCACCAT CGTTGAAGTCGAAGAGATCGTCGAGACCGGCACGTTCGACCCGGACGAGGTCCACACCCCGGGCGTGTTCGTGCAGCGCA TCGTGCTGAACGCCCATCCGGAAAAACGCATCGAGCAGCGCACCGTGCGCGCCAAATAA Protein sequence : MNKIYASAAEALAGIVKDGQTIAVGGFGLCGIPEALIGALRDSGAKGLTCISNNAGVDGFGLGRLLETRQIKKMISSYVG ENKEFERQYLSGELELEFTPQGTLAEKLRAGGAGIPAFFTRTGVGTVVADGKEVREFDGEQYVMERSLIADVALVKAWKA DKSGNLKYHRTARNFNPMCAMAGRITIVEVEEIVETGTFDPDEVHTPGVFVQRIVLNAHPEKRIEQRTVRAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAO18070.1 | unknown | Not tested | TTSS locus | Protein | 8e-31 | 48 |
