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Name : tISRso12b (RSc1439) Accession : NP_519560.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : ISRSO12-transposase ORFB protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1542234 - 1542938 bp Length : 705 bp Strand : + Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGCACGAGATCGCCAGCACCCGGGTACGGTACGGCTTCTGGCGCATTTACGTGCTGATTCGTCGCGAGGGTTGGTTGGT CAATCACAAACGCGTCTACCGCCTGTACAAGGAGGAAGGCTTGAATCTGCGCACCAAAAGACCCAGGCGCCGCAAGGCGG CCGCACATAGACTCGAGCGCCCGGTGCTCACCGCACCGAATCAGAGCTGGAGCATGGATTTCGTATCCGACGCCTTGTTT AACGGCAACAAGTTCCGCGCACTGACTGTGGTGGACAACCATACGCGGGAATGCCTGGCGATTGAGGCTGCCCCGTCGCT AAACGGCAGTGACGTTGTGCGTGTGTTGCAAGCCATCGTGATCCGACGAGGCATGGTGCCCGCACGCATCCAGGCTGACA ACGGGCCGGAATTTGTGTCGCTGGCGCTGGACAAGTGGGCGTATGAGGCAGGCGTAACGCTCGACTTCTCTCGGCCTGGC AAGCCTACCGACAATGCCTTCATCGAGTCCTTCAACGGCAGCTTGCGCGATGAATGCCTGAACACGTACTGGTTCCTGTC CCTTGAAGACGCACGCCAAAAGCTCGAAAACTGGAGGCACGATTACAATCATTTCCGGCCACATTCGGCGCTGGATGACA CCGCACCAGCGCTCTTTGCACGGCAGTTTGCCATTACACCAACCACGCCGGCTTCTCTAGCCTGA Protein sequence : MHEIASTRVRYGFWRIYVLIRREGWLVNHKRVYRLYKEEGLNLRTKRPRRRKAAAHRLERPVLTAPNQSWSMDFVSDALF NGNKFRALTVVDNHTRECLAIEAAPSLNGSDVVRVLQAIVIRRGMVPARIQADNGPEFVSLALDKWAYEAGVTLDFSRPG KPTDNAFIESFNGSLRDECLNTYWFLSLEDARQKLENWRHDYNHFRPHSALDDTAPALFARQFAITPTTPASLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 4e-38 | 51 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 5e-44 | 50 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 3e-34 | 46 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 1e-26 | 45 |
