|
Name : tISRso12a (RSc1438) Accession : NP_519559.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : isrso12-transposase orfa protein Function : - COG functional category : - COG ID : - EC number : - Position : 1541818 - 1542084 bp Length : 267 bp Strand : + Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAAGAAGTCGAAGTTCACGGAAGAGCAGATTGCGTTCGCGCTGCATCAGGCCGAGACAGGTGTCTCGGTCGAAGAGGT ATGCCGCAAGATTGGCATCTCGCAAGCGACGTTTTACGCGTGGAAGAAGAAGTACGGCGGTATTGGCGTGAGCGAGCTAC GGCGGTTGCGTCAACTTGAAGAGGAGAACGCCAAGCTGCGGCGCTTGGTGGCCGACTTGAGCCTGGACAAGGTCATGCTG CAGGATGTTCTGAGAAAAAAGCTCTAA Protein sequence : MKKSKFTEEQIAFALHQAETGVSVEEVCRKIGISQATFYAWKKKYGGIGVSELRRLRQLEEENAKLRRLVADLSLDKVML QDVLRKKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | AAL78293.1 | putative truncated transposase | Not tested | Hrp PAI | Protein | 7e-22 | 72 |
| XCV0438 | YP_362169.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 1e-21 | 72 |
| unnamed | ABR13351.1 | insertion sequence IS407 OrfA | Not tested | PAGI-5 | Protein | 2e-12 | 50 |
| unnamed | ABR13539.1 | insertion sequence IS407 OrfA | Not tested | PAGI-8 | Protein | 2e-12 | 50 |
| unnamed | AAK01522.1 | transposase A | Not tested | PAGI-1 | Protein | 4e-12 | 49 |
| EXA9 | ABD94680.1 | IS407 transposase OrfA | Not tested | ExoU island A | Protein | 3e-12 | 49 |
| trp1400A | CAB46581.1 | IS1400 transposase A | Not tested | HPI | Protein | 1e-13 | 46 |
