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Name : tISRso11b (RSc1436) Accession : NP_519557.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : isrso11-transposase orfb protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1540188 - 1541024 bp Length : 837 bp Strand : - Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : GTGAGTGCGCTGCGTGAGCGGCATTCATTGTCGAGCTTGCTCAAGGCCGCGAATCTCGCACGCAGCACGTACTACTACCA GATGGCGACAGGCCAGGCAGAGGATCGTCACGGCGCGCTCAAGGAGCGCATTCAGCACATCTATGCCCAGCACAAGGGCC GATATGGCTACCGCCGGATCACGGCGACGCTCCGTCGGGCAGGGACGTTGGTGAATCACAAGACCGTACAGCGATTGATG TCGGCGCTACAGTTGAAGTCACTCGTGCGGCCGAAGAAATACCGCTCTTACCTCGGGCAAGTCGGGCGGGTTGCTCCCAA TCTGCTACAGCGCGAGTTTGAGGCGAGCAAGCCGAACGAGAAGTGGGTAACGGACGTGACGGAGTTCAACGTCGGCGGCA AAAAGCTGTACCTGTCGCCCGTCCTGGACCTATACAACGGAGAGATCGTCGCCTGGCAAACCAGTGAACGACCTGATTAC ACGCTGATCCGGGAGATGCTCGACAAGGCGTTGCGCAAGCTGCGCCCGTGCGAGACGCCGATGCTGCATTCGGATCAAGG CTGGCCGTATCAAATGGCAGCGTATCGTCGCAAACTGGCCGCGCGAGGCCTGCGCCAGAGCATGTCCCGCAAAGGCAACT GCCTAGACAATGCGGCAATGGAAAGCTTCTTCGGCACACTCAAGTCAGAGTGCTTCCGGTTAGAGCGCTTCGCGGACATC GACCAACTGCGACGCGCCATTGCCGAATACATCCGGTACTACAATCACGAGCGCATCAAGATCAAGCTAAAAGGGCTGAG CCCTGTGCAATACAGGACCCAGCCCTTGGCCGCCTAA Protein sequence : MSALRERHSLSSLLKAANLARSTYYYQMATGQAEDRHGALKERIQHIYAQHKGRYGYRRITATLRRAGTLVNHKTVQRLM SALQLKSLVRPKKYRSYLGQVGRVAPNLLQREFEASKPNEKWVTDVTEFNVGGKKLYLSPVLDLYNGEIVAWQTSERPDY TLIREMLDKALRKLRPCETPMLHSDQGWPYQMAAYRRKLAARGLRQSMSRKGNCLDNAAMESFFGTLKSECFRLERFADI DQLRRAIAEYIRYYNHERIKIKLKGLSPVQYRTQPLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 8e-77 | 57 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 8e-59 | 55 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 7e-59 | 55 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 2e-63 | 51 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 1e-45 | 47 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 6e-46 | 47 |
| SE0101 | NP_763656.1 | transposase | Not tested | SCCpbp4 | Protein | 2e-22 | 41 |
