Gene Information

Name : alr (RSc1371)
Accession : NP_519492.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 1460580 - 1461707 bp
Length : 1128 bp
Strand : +
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
ATGCCAAGACCCATTCAGGCCGTCATCCACGGCCCCGCACTCGTCAACAATCTCCAGGTGGTTCGCCGCCACGCCGCGGA
CTCGCGCGTCTGGGCGGTCATCAAGGCCAACGCATATGGCCACGGCATCGAGCGTGCCTATGAGGGGCTGCGCCAGGCCG
ACGGCTTCGGCCTGCTCGATCTGGACGAGGCCGTCCGGCTGCGCCAGCTGGGCTGGCAGGGGCCGATCCTGCTGCTCGAG
GGCTTCTTCAAGCCGGAAGACCTGGCGCTGGTCGAGCAATACCGACTGACCACCACCGTCCATTGCGAGGAGCAGTTGCG
CATGCTGGAGCTGGCGCGCCTGAAGGGGCCGGTGAGTATCCAGCTGAAGATCAACACGGGCATGAGCCGCCTGGGCTTCG
CGCCGGCCGCGTACCGTGCGGCCTGGGAGCATGCCCGCGCCATTTCCGGCATCGGCACCATCGTCCACATGACGCATTTT
TCCGATGCCGACGGCCCGCGCGGCATCGATCACCAGTTGGCCGCCTTCGAGCAAGCCACGCAGGGGCTGCCGGGCGAGGC
GAGCCTGTCCAACTCCGCCGCCACGCTGTGGCATCCGAGGGCGCACCGGGACTGGGTGCGCCCCGGCGTGATCCTGTACG
GTGCTTCGCCGACCGGCGTGGCCGCCGACATCGAAGGCACCGGCCTGATGCCGGCCATGACGCTCAAGAGCGAGCTGATC
GCCGTCCAGGACCTGCAGCCGGGCGCGACCGTCGGCTACGGCTCGCGCTTCGAGGCCGAGCAGCCGATGCGCATCGGCAT
CGTCGCGTGCGGCTATGCCGATGGCTATCCGCGCCATGCTCCCGGCTGGGACGGCAACTACACGCCGGTGCTGGTGGACG
GCGTGCGCACGCGCATGGTGGGCCGCGTGTCGATGGACATGATCACCGTGGACCTGGCCGAAGTGCCGGGCGCCCGCGTT
GGCGCACCCGTCACGCTGTGGGGGCAGGGCCTGCCGATCGACGAGGTGGCGCATGCCGCCGGCACGGTCGGCTACGAGCT
GATGTGCGCGCTGGCGCCGCGCGTGCCGGTGACGGTCGAGCCGGCCGGCGCGGCGGATGCCGGCGAGACGCTCGGCAAGG
CGGCCTGA

Protein sequence :
MPRPIQAVIHGPALVNNLQVVRRHAADSRVWAVIKANAYGHGIERAYEGLRQADGFGLLDLDEAVRLRQLGWQGPILLLE
GFFKPEDLALVEQYRLTTTVHCEEQLRMLELARLKGPVSIQLKINTGMSRLGFAPAAYRAAWEHARAISGIGTIVHMTHF
SDADGPRGIDHQLAAFEQATQGLPGEASLSNSAATLWHPRAHRDWVRPGVILYGASPTGVAADIEGTGLMPAMTLKSELI
AVQDLQPGATVGYGSRFEAEQPMRIGIVACGYADGYPRHAPGWDGNYTPVLVDGVRTRMVGRVSMDMITVDLAEVPGARV
GAPVTLWGQGLPIDEVAHAAGTVGYELMCALAPRVPVTVEPAGAADAGETLGKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 4e-94 59