Gene Information

Name : ssuB (RSc1341)
Accession : NP_519462.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : aliphatic sulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 1428656 - 1429510 bp
Length : 855 bp
Strand : +
Note : Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGCAAAGCAACGCCACCGAGCATGCCGCGCTGGAGCGCGTGGCGCCCCGCGGCACTGCGCTGCGCATCGCGCACGCGGT
CAAGCGCTACGGCGAGCGCGAGGTACTGTACGGCATCGACCTGGAGATCGCGCCGGGCGAGTTCGTCGCCATCGTCGGGC
GCAGCGGCTGCGGCAAGAGCACGCTGCTGCGGCTGATCGCGGGGCTGGAGGGCATCGACGGCGGCAGCCTGCATCGCGAC
GGCGCGGCCGGAGGTGGCCTGCACGACGATGCCCGCGTGATGTTCCAGGACGCCCGCCTGCTGCCGTGGAAGCGGGTGCT
CGACAACGTCGCGCTGGGCCTGCCCAGGACGCACCGCGCGCAGGCCGCCGAGGTGCTGGCGCAGGTCGGCCTGGCCGAGC
GCGCGGGCGAATGGCCGGCGCGCCTGTCGGGCGGCCAGCGCCAGCGCGTGGCCCTGGCCCGCGCGCTGGTGCACCGCCCG
CGCCTGCTGCTGCTCGACGAGCCGCTTGGCGCGCTCGATGCGCTCACCCGCATCGACATGCAGAACCTGATCGAAGGTCT
GTGGCAGCGCCTGGGCTTCACCGCCGTGCTGGTCACCCACGATGTGGCCGAGGCCGTGGCCCTGGCCGACCGCGTGGTGC
TGATCGAGGACGGCCGCATCGCGCTCGACGCGCGCATCGACCTGCCACGCCCGCGGCACCGCGGCGCGCCGGCGTTTGCG
CGGCTGGAGGAAGCCATCCTCAACCGTGTGATGCAGCGCAAGGCCGATCCGGATGAAGTGACCGATGCGCGCGCGCACGT
GGCGCGGCCGTCCCCCTGGGAGGTGTCGGCCGCGGCCGTGGGCTGGGCCGTGTAA

Protein sequence :
MQSNATEHAALERVAPRGTALRIAHAVKRYGEREVLYGIDLEIAPGEFVAIVGRSGCGKSTLLRLIAGLEGIDGGSLHRD
GAAGGGLHDDARVMFQDARLLPWKRVLDNVALGLPRTHRAQAAEVLAQVGLAERAGEWPARLSGGQRQRVALARALVHRP
RLLLLDEPLGALDALTRIDMQNLIEGLWQRLGFTAVLVTHDVAEAVALADRVVLIEDGRIALDARIDLPRPRHRGAPAFA
RLEEAILNRVMQRKADPDEVTDARAHVARPSPWEVSAAAVGWAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 6e-36 52
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-15 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-15 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-15 42