Gene Information

Name : RSc1326 (RSc1326)
Accession : NP_519447.1
Strain : Ralstonia solanacearum GMI1000
Genome accession: NC_003295
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.2
Position : 1411206 - 1412447 bp
Length : 1242 bp
Strand : +
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
GTGAAAACGATCCAGAAATCCGCCAAGCTCAACAACGTCTGCTATGACATCCGCGGCCCCGTGCTGGAGAAGGCCAAGCA
GATGGAGGAAGAGGGCCACCAGATCATCAAGCTGAACATCGGCAACCTGGCCCCGTTCGGCTTCGATGCCCCGGAAGAGA
TCCAGCAGGACATGATCCGCAACCTGCCCAACTCGGCCGGCTACTCGGATTCCAAGGGCATCTTCGCGGCGCGCAAGGCG
GTGATGCACTATACGCAGCAGCAGGGCATCAAGAACGTCACGCTGGACGACATCTACCTGGGCAACGGCGCCTCCGAGCT
GATCGCGCTGGCCACCAACGCGCTGCTCGACGCCGGCGACGAACTGCTGCTGCCCGCACCCGATTACCCGCTGTGGACCG
CCATGACCAGCCTGTCGGGCGGCACGCCGGTGCATTACCTGTGCGACGAGTCCAACGGCTGGATGCCCGACCTGGACGAC
ATCCGCGCCAAGATCACGCCCAACACCAAGGGCATCGTCGTCATCAACCCGAACAATCCGACCGGTGCGCTGTATTCGGA
CGCGCTGCTGCACGACATCATCGCCATCGCACGCGAGCACGGGCTGGTGATCTTTGCCGACGAGGTGTACGACAAGGTGC
TGTTCGACGACAATCGGCACACCGCGATGGCCTCGCTGTCGGAGGATGTGCTGACCGTCACGTTCAACAGCCTGTCCAAG
AGCTACCGCTCGTGCGGCTACCGCGCGGGCTGGATGGTGGTGTCGGGCGACAAGCGTCCGGCCAAGGACTACATCGAAGG
CCTGAACATGCTGTCGTCGATGCGCCTGTGCGCCAATGTGCCGGGGCAGTGGGCGATCCAGACGGCGCTGGGCGGCTATC
AGAGCATCAACGACCTGGTGGCGCCGGGCGGCCGCATGCGCCGCCAGCGCGACCTGGCCTACGAACTGATCACCGCCATT
CCCGGCGTGAGCTGCGTCAAGCCGAAGGCGGCGCTGTACATGTTCCCGCGCCTGGATCCGTCGGTGTACCCGATCGACGA
CGATCAGACCTTCATTCGCCAACTGCTGGAGGAAGAGCGCGTGCTGCTGGTGCAGGGCACGGGCTTCAACTGGCATTCGC
CGGACCACTTCCGCATCGTCTTCCTGCCGCACGAGGACGACCTGCGCGAGGCCATCGGCCGAATTGCGCGCTTCCTGGAG
CGGTACCGTCAGCGTCACGGTACTGGCATCCGGGCCGCCTGA

Protein sequence :
MKTIQKSAKLNNVCYDIRGPVLEKAKQMEEEGHQIIKLNIGNLAPFGFDAPEEIQQDMIRNLPNSAGYSDSKGIFAARKA
VMHYTQQQGIKNVTLDDIYLGNGASELIALATNALLDAGDELLLPAPDYPLWTAMTSLSGGTPVHYLCDESNGWMPDLDD
IRAKITPNTKGIVVINPNNPTGALYSDALLHDIIAIAREHGLVIFADEVYDKVLFDDNRHTAMASLSEDVLTVTFNSLSK
SYRSCGYRAGWMVVSGDKRPAKDYIEGLNMLSSMRLCANVPGQWAIQTALGGYQSINDLVAPGGRMRRQRDLAYELITAI
PGVSCVKPKAALYMFPRLDPSVYPIDDDQTFIRQLLEEERVLLVQGTGFNWHSPDHFRIVFLPHEDDLREAIGRIARFLE
RYRQRHGTGIRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-109 57
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-109 57
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-109 57
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-109 57