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Name : thiC (RSc0113) Accession : NP_518234.1 Strain : Ralstonia solanacearum GMI1000 Genome accession: NC_003295 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 130368 - 132263 bp Length : 1896 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGCCCCAAGCCAAAAACGCCCCCGCCGCCTCATTCGACTCGCTGCAGACCGAGCTCGACCAGAAATTCGCCTACCCGGC CTCCAGCAAGACCTACATCGCCGGCAGCCGCCCAGACCTGCGCGTGCCGATGCGCACCATCAAGCAGACCGCCACGCGCA CCGACCAGGGCGAAATGCTGAACCCGCCGATTCCCGTGTACGACACCTCGGGCCCGTACTCCGACCCCGACGTGCACATC GACCTGAAGGCGGGCCTTGCCCCGCTGCGCGCCAAGTGGATCGACGAGCGCGGCGACACCGTGGTGCTGCCGAGCCTGTC GTCGGAATACGGCCAGGCACGCGCGCATGACCCGGCCACGGCCCACCTGCGCTTTGCGCAACTGACCAACCCGCGCCGCG CCAAGCCGGGCGCGAACGTGAGCCAGATGCATTACGCGCGCCGCGGCATCATCACGCCCGAGATGGAATATGTCGCGTTG CGTGAATCGCTGAACCTGCAGGCGCTGCAAGACAAGCCCGAGTACCGCAAGCTGCTCAAGCAGCATCCGGGCTTCTCGTA CGGCGCCAACCTGCCGCAGCGCCCGGAAGACATCACGCCGGAATTCGTGCGCCAGGAAATCGCCGCCGGCCGCGCCATCA TCCCGGCCAACATCAACCACGTGGAGCTGGAGCCGATGGCCATCGGCCGCAACTTCCGCGTGAAGATCAACGGCAACCTG GGCAACTCGGCGGTCACCTCGTCGCTGGCCGAGGAAGTGGAAAAGATGGTGTGGTCGATCCGCTGGGGCGCCGACACGAT CATGGATCTGTCCACCGGCAAGCACATCCACGAGACGCGCGAATGGATCCTGCGCAACTCGCCGGTGCCCATCGGCACGG TGCCGATCTACCAGGCGCTGGACAAGACCGGCGGCGTGGCCGAAGACCTGACGTGGGAGATGTTCCGCGACACCCTCATC GAGCAGGCCGAGCAGGGCGTGGACTACTTCACCATCCACGCCGGCGTGCTGCTGCGCTATGTGCCGCTCACGGCCGACCG CATCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCCAAGTGGTGCCTGGCGCATCACAAGGAGAACTTCCTGTACA CGCACTTCGACGAGATCTGCGAAATCATGAAGGCGTACGACGTGTCGTTCAGCCTGGGTGACGGCCTGCGCCCGGGCTGC ATCGCCGACTCGAACGACGCCGCGCAGTTCGGCGAGCTGTACACGCTGGGCGAGCTGACCAAGAAGGCGTGGGAGCACGA CGTGCAGGTCATGATCGAAGGCCCGGGCCACGTGCCGCTGCAGCGCGTGCAGGCCAACATGGACGAAGAGCTCAAGCACT GCTTCGAGGCCCCGTTCTACACGCTGGGCCCGCTGGTGACCGACATCGCTCCGGGCTACGACCACATCACCAGCGGCATC GGCGCGGCCAACATCGGCTGGTACGGCACCGCCATGCTGTGCTACGTCACGCCCAAGGAGCACCTGGGCCTGCCGGACAA GGAAGACGTGCGCGAAGGCATCATCACCTACAAGATCGCCGCGCATGCGGCCGACCTTGCGAAGGGCTGGCCGGGCGCGC AGCTGCGCGACAACGCGCTGTCGAAGGCGCGTTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTCGACCCGGAA AAGGCGCGCGCCTTCCACGACGAGACCCTGCCGGCCGAAGGCGCCAAGATCGCCCACTTCTGCTCGATGTGCGGGCCGAA ATTCTGCTCGATGAAGATCACGCAGGAAGTGCGCGACTACGCCGCCTCGCTCGACGCGAACGCCACCGCCGCGGAGCATG GCATGGAAGAAAAGTCGATCGAGTTCCGCAAGGCCGGCGCAAAGATTTACAGCTGA Protein sequence : MPQAKNAPAASFDSLQTELDQKFAYPASSKTYIAGSRPDLRVPMRTIKQTATRTDQGEMLNPPIPVYDTSGPYSDPDVHI DLKAGLAPLRAKWIDERGDTVVLPSLSSEYGQARAHDPATAHLRFAQLTNPRRAKPGANVSQMHYARRGIITPEMEYVAL RESLNLQALQDKPEYRKLLKQHPGFSYGANLPQRPEDITPEFVRQEIAAGRAIIPANINHVELEPMAIGRNFRVKINGNL GNSAVTSSLAEEVEKMVWSIRWGADTIMDLSTGKHIHETREWILRNSPVPIGTVPIYQALDKTGGVAEDLTWEMFRDTLI EQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGC IADSNDAAQFGELYTLGELTKKAWEHDVQVMIEGPGHVPLQRVQANMDEELKHCFEAPFYTLGPLVTDIAPGYDHITSGI GAANIGWYGTAMLCYVTPKEHLGLPDKEDVREGIITYKIAAHAADLAKGWPGAQLRDNALSKARFEFRWEDQFNLGLDPE KARAFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAASLDANATAAEHGMEEKSIEFRKAGAKIYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 80 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
