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Name : clpB (alr5084) Accession : NP_489124.1 Strain : Nostoc sp. PCC 7120 Genome accession: NC_003272 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding subunit B Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6054894 - 6057401 bp Length : 2508 bp Strand : + Note : ORF_ID:alr5084 DNA sequence : ATGAAGGCGCTACTGGAACAAGATGGTTTGGCCAGTGGGATTTTGACCAAAGCAGGTGTGAACTTACAAAAGATTAGCGA TCGCACTGAACAATACATCCAACGCCAACCTAAAGTCTCAGGTAACAGCACTTCAGTATACCTGGGGCGGAGTCTGGATA CGCTGTTAGACCGGGCAGAAGCACATCGAAAAGATTTTCAAGACGAATATATTTCTATTGAACATTTATTACTGGCTTAT CCTAAAGACGATCGCTTCGGCAAAGGTTTATTCCAAGAATTCGCTTTAGACGAAAGCAAGCTCAAAAATATCATTAAACA AGTTCGTGGGAGCCAAACAGTGACTGACCAAAATCCAGAAGGCAAATACCAATCACTGGAAAAATACGGGCGTGACCTCA CAGAAGCTGCCCGGAAAGGTCAACTTGATCCAGTCATTGGGCGGGATGATGAAATTCGGCGTACCATCCAAATTCTTTCT CGCCGCACCAAAAATAACCCCGTACTCATTGGTGAACCGGGTGTGGGTAAAACGGCGATCGCTGAAGGTCTAGCACAGCG TATTGTGGCTGGCGATGTACCCCAGTCCCTCAAAGACCGCAAACTAATCTCCTTAGATATGGGGGCGATGATTGCTGGGG CAAAATTCCGAGGAGAATTTGAAGAACGTCTGAAAGCAGTATTAAAGGAAGTCACCGAATCTGGCGGCAATATAGTTTTA TTTATTGATGAAATACATACCGTTGTCGGTGCGGGTGCAACTCAAGGGGCAATGGATGCCGGTAATTTGTTAAAACCCAT GCTGGCGCGGGGTGAACTGCGCTGTATTGGGGCGACAACTTTAGATGAGTACCGGAAATACATTGAAAAAGATGCGGCAC TAGAAAGACGCTTCCAACAAGTTTACGTAGACCAGCCTAGTGTTGAAGATACTATTTCTATTTTACGTGGCTTGAAGGAA CGGTATGAAGTCCACCACGGGGTAAAAATTTCTGATAGTTCCTTAGTTGCTGCTGCTACATTGTCCAGTCGTTATATTAG CGATCGCTTCCTCCCAGATAAAGCCATTGATTTGGTAGACGAAGCTGCCGCTAGACTGAAAATGGAGATTACTTCTAAGC CAGAAGAACTCGATGAAATAGACCGGAAGATTCTGCAATTGGAGATGGAAAAGCTATCTCTGCAAAAAGAAAGTGATGCA GCCTCCCGCGAACGCCTGGAAAGATTAGAAAAAGAACTGGCGGATCTCAAGGAAGAGCAAAGAACCCTCAATACCCAATG GCAATCGGAAAAGGATGTCATTAATAAACTTCAGTCCGTTAAGGAAGAGATTGACAAAGTTAATTTAGAAATTCAGCAAG CAGAAAGAAATTACGACCTCAACCGCGCCGCAGAATTAAAATATGGCAACTTAACAGACTTGCACCGGAGACTGGAAGCG ACAGAACGGGAATTGTCCCAAACCCAAGGTACGGGTAAATCCCTGTTGCGAGAGGAAGTAACCGAAGCCGACATTGCGGA AATCATTTCTAAGTGGACAGGAATCCCCATCAGTAAATTGGTGGAATCGGAAAAAGAAAAACTACTGCACTTAGAAGATG AACTCCATCACCGGGTAATTGGACAAGATGAAGCCGTCACAGCTGTCGCCGATGCCATTCAGCGATCGCGTGCTGGGTTG GCCGATCCTAATCGGCCCACAGCTAGTTTTGTTTTCTTAGGCCCCACTGGTGTAGGTAAAACTGAACTGGCGAAGGCGTT AGCGTCATATATGTTCGACACCGAAGACGCACTAGTCCGGATTGATATGTCGGAATACATGGAGAAACACGCCGTATCTC GCTTAATTGGTGCGCCTCCTGGTTATGTAGGTTATGAAGAAGGCGGACAACTCACAGAAACAATTCGTCGCCGTCCTTAC GCCGTAATTCTCTTCGACGAAATCGAGAAAGCCCACCCCGATGTATTTAATATTTTCTTGCAAATCCTCGATGATGGTCG CGTCACCGATGCCCAAGGTCATACAGTGGACTTCAAGAACACGATTATTATCATGACCAGTAACATCGGTTCGCAGTACA TTCTCGATATAGCGGGGGATAACTCACGCTATGATGAAATGCGCCATCGGGTGATGGAGGCGATGCGAAATAGCTTCCGT CCTGAGTTCCTCAACCGGATTGATGAAGTAATTATCTTCCACAGTTTAGATAAGAAAGAATTACGACAAATTGTCCAGTT GCAAGTGGAAAGGTTAAAGGCCAGATTAGACGATCGCAAAATATCCCTCAGGCTCTCCGATGTTGCACTAGACTTTTTGG CAGAAGTTGGATACGACCCAGTATTCGGGGCGCGTCCACTGAAGCGAGCGATTCAGCGCGAGTTAGAAACGCAAATTGCT AAGGCGATTTTGCGCGGCGAATTTAACGATGGAGACACGATTTTTGTCGATGTGCAGAATGAAAGGTTGTCTTTCAGCCG CTTACCTGTTGAGGTGTTTAGTAGTTAG Protein sequence : MKALLEQDGLASGILTKAGVNLQKISDRTEQYIQRQPKVSGNSTSVYLGRSLDTLLDRAEAHRKDFQDEYISIEHLLLAY PKDDRFGKGLFQEFALDESKLKNIIKQVRGSQTVTDQNPEGKYQSLEKYGRDLTEAARKGQLDPVIGRDDEIRRTIQILS RRTKNNPVLIGEPGVGKTAIAEGLAQRIVAGDVPQSLKDRKLISLDMGAMIAGAKFRGEFEERLKAVLKEVTESGGNIVL FIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKE RYEVHHGVKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDA ASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQSVKEEIDKVNLEIQQAERNYDLNRAAELKYGNLTDLHRRLEA TERELSQTQGTGKSLLREEVTEADIAEIISKWTGIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAGL ADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETIRRRPY AVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQYILDIAGDNSRYDEMRHRVMEAMRNSFR PEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQIA KAILRGEFNDGDTIFVDVQNERLSFSRLPVEVFSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-104 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_489124.1 | endopeptidase Clp ATP-binding subunit B | VFG2084 | Protein | 7e-108 | 43 |
| clpB | NP_489124.1 | endopeptidase Clp ATP-binding subunit B | VFG2076 | Protein | 1e-116 | 42 |
