Gene Information

Name : all4727 (all4727)
Accession : NP_488767.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5634737 - 5635453 bp
Length : 717 bp
Strand : -
Note : ORF_ID:all4727

DNA sequence : 
ATGGACATTCTAATTGTTGAGGATGAATCAGAAATTGCTCAGTTAATTCAACATTCTTTAGAAAAAGAGGGCTTTTCCTG
TCGGACTAGCCGCGATGGGATCAATGCTCTACAAATGTTTCACGAACGACCACCAGATTTAATCATCCTAGACCTGATGA
TTCCTGGGCTGGATGGGTTGGAAGTTTGCGCGAGAATTCGCCAGAAACCTGGGGCAAAAGACCCTTATATACTAATGCTC
ACAGCTAAAGGTGAGGAAATAGACCGGGTAATCGGCTTGTCTACGGGTGCTGATGACTATATGGTTAAACCCTTCAGCCC
TAGAGAGTTGGTGGCGCGTGTCAGGGCGCTTCTACGGCGCAGCTTACGTCAAGGGGGACAAAATCAGGTAAATCGGACTC
AACACTTTATAGTAGATTTAGACCAACGAACTGCCAGTCGTCAAATAGATTCCCATCAACCAGAAGCTTTAGATTTAACC
ACTTTAGAATTTAATTTATTAAGCACTTTTGTCAGCAATCCTGGGCGAGTGTGGAACCGTACCCAACTAATTGACAAATT
GTGGGGAGATAATTTTTTTGGTGATGAGCGTGTTGTAGATACTCATGTAGCTAGGCTCAGGAAAAAAATTGAACCTGATC
CCACCAATCCCAGTTTTATTAAAACTGTTGTCGGAGTTGGCTATAAATTTGAAGACTCTCCTGTAATTTCCGCATGA

Protein sequence : 
MDILIVEDESEIAQLIQHSLEKEGFSCRTSRDGINALQMFHERPPDLIILDLMIPGLDGLEVCARIRQKPGAKDPYILML
TAKGEEIDRVIGLSTGADDYMVKPFSPRELVARVRALLRRSLRQGGQNQVNRTQHFIVDLDQRTASRQIDSHQPEALDLT
TLEFNLLSTFVSNPGRVWNRTQLIDKLWGDNFFGDERVVDTHVARLRKKIEPDPTNPSFIKTVVGVGYKFEDSPVISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
all4727 NP_488767.1 two-component response regulator HE999704.1.gene2815. Protein 6e-37 44
all4727 NP_488767.1 two-component response regulator NC_012469.1.7685629. Protein 2e-35 44
all4727 NP_488767.1 two-component response regulator NC_011595.7057856.p0 Protein 5e-34 43
all4727 NP_488767.1 two-component response regulator NC_010410.6002989.p0 Protein 5e-34 43
all4727 NP_488767.1 two-component response regulator NC_010400.5986590.p0 Protein 2e-33 43
all4727 NP_488767.1 two-component response regulator CP001138.1.gene2239. Protein 1e-30 43
all4727 NP_488767.1 two-component response regulator CP000034.1.gene2186. Protein 4e-31 43
all4727 NP_488767.1 two-component response regulator NC_002695.1.916589.p Protein 4e-31 43
all4727 NP_488767.1 two-component response regulator CP000647.1.gene2531. Protein 1e-31 43
all4727 NP_488767.1 two-component response regulator BAC0596 Protein 1e-30 43
all4727 NP_488767.1 two-component response regulator BAC0039 Protein 4e-31 43
all4727 NP_488767.1 two-component response regulator CP001918.1.gene3444. Protein 2e-31 43
all4727 NP_488767.1 two-component response regulator AE000516.2.gene3505. Protein 3e-34 42
all4727 NP_488767.1 two-component response regulator CP004022.1.gene1676. Protein 1e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
all4727 NP_488767.1 two-component response regulator VFG1702 Protein 2e-27 41