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Name : alr4604 (alr4604) Accession : NP_488644.1 Strain : Nostoc sp. PCC 7120 Genome accession: NC_003272 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease chain R Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 5501462 - 5504353 bp Length : 2892 bp Strand : + Note : ORF_ID:alr4604 DNA sequence : ATGAAATACCTCACCGAAGACGAAATCGAACAATACCAACTTCAACTTTTGCAAAACCTTGGTTATAGCTACAGCAACGG CTACGACATCCAACCAGAAGGCATCAAGCAAGAGCGAGAAAGCTTCGGTGAAGTAATTTTAAAACATAGACTCCCACAGG CAATATCACGAATTAACCCCACCATTCCCCATGATGCCCAATATCAGGCACAACGGGAAATATTTAATATTGCTAGTTCC GACCTACTCAACAACAACGAAATATTCCATAAATACCTCACAGAAGGCATCACCGTTGAATATCAAAAAAACGGCGAAAC CAGAGGCGAACCTGTTAAATTAATTGACTGGGAACACCCCGAAAATAACGAATTTCTCGCCGTCAACCAATTTACAGTAA TTGAAGACAACCATAACCACCGCCCCGATATTGTCCTGTTCATTAACGGCTTACCCCTCGTCGTCATCGAACTAAAAAAC GCCGCCAATAAAAAAGCCAATCTTAACGCCGCCTATAACCAACTCCAAACCTATAAACGCAGAATCCCTAGCCTATTTAC CTACAATGCCCTATTAGTAATTTCAGATGGGCTATCCGCCCGTGCTGGTTCACTTACGGCTGGGTTTAACCGCTTCTCCA CATGGAAAAACCCCACAGGCGAAAACCAGATAAACGAACTAGAAATTTTAACTAATGGGCTACTCAACAAGCAAACTTTA CTAGATTTAATTCGTCACTTCACTGTATTTGAAAAGTCCAAAACAGAAGACCTGAAAACAGGCATAGTTAGCATTACCAC CATTAAAAAAATCGCCGCCTATCATCAATATTACGCCGTTAATAAAGCCGTCGAATCTATTATTAATGCCTCATCCCAAG AAGGCGCACGCAAAGGCGGTGTACTTTGGCATACCCAAGGAAGCGGTAAATCCCTTTCAATGGTATTTCTGGCAGGAAAA CTGGTTTTAAACGAAAACCTCCAGAACCCCACCATTGTCATGTTGACAGATCGCAATGACTTAGATGATCAACTATTTGA TACCTTCGCAGGTTGTCAGCAACTCCTCAGACAAGACCCCCAACAAGCAGGAGATAGAGAACAAGTCCGCCAATTACTTA ACACCAACTCAGGCGGCATCATATTTACCACCGTCCAGAAATTTTCCCCTGCTGATGGCGAAACCCTCTATCCCCAAATC AGCCCTCGCCCTAATATCATTGTCCTGGCTGATGAAGCCCACCGCAGCCAATACGGTTTCACAGCTAAACAAGTTAATGT CCTTGATGCTGAAGGTAACGTGATTGGTAAACGCACCAAATACGGCTTTGCAAAATATATTAGACAAGCCTTACCCAATG CTACCTTTGTCGGCTTCACAGGTACACCCGTAGAACAAACCGACAAAAACACCCCCGCCATTTTTGGTGAATATATCGAC ATCTACGACATCTCCCAAGCCGTCAAAGATGGGGCAACCGTGCCGATTTATTACGAAAGCCGCTTAGTACAAGTTGATTT AGACGCAGCAGGTAGACAACTCCTAGATGAACTAGACGAAGACCTGAGCTTTGAAGACCTCAGCACCACCCAAAAAGCCA AAGCTAAACAAACCAAACTTGAGGCGATTGTTGGTTCTACTAAAAGAATAAGACAGATTGCCCAAGATATTGTCACCCAC TTTGAGGCACGGCAACAGGTAAACAAAGGCAAAGCCATGATTGTCACCATGAGCCGCCAAATCGCCGTTAATCTCTACGA TGCCATAATTCAACTCCGCCCTGATTGGCACAGTGAGGATCTCAACTTAGGCAAAATCAAAGTTGTAATTACTACCTCTG CCGCCGATGAAGGTAATTTAGTTAAACATCACACCAGTAAAGCCCAACGTCAAAACCTCGCCCAACGCCTCAAAGACCCC GAAAACTCCCTAGAATTAGCCATAGTCTGTGATATGTGGCTCACAGGCTTTGATGCCCCATGTCTGCACACTATGTATAT TGATAAACCGCTTAAAAGTCATAATTTAATGCAAGCGATCGCCAGAATTAACCGCGTCTATTTTGAAAAAACAGGCGGTT TGATTGTGGACTATCTAGGACTAGCCACCGAACTCAAAAAAGCCCTATCCTTTTATTCTCAAAGTGGCGGTAAAGGCGAC CTCACCCTCAATCAAGAAGTGGCGGTGGGACTACTCCTAGCCAAATTGGAAATCGTCGAGCAAATCATATCAGGCTTTAC CTATCAGCATTATTTTGAGGCTGACACTGGCGAAAAATTGAATATCCTCAAAAATGCCACTAACTACGTAGCTGCACCAA ACATCAAAGATAGATTTCTCAGTGAAGTTATCGCCCTATCTAAAGCCCATTCTCTCGCCGTACCCCATCCCCAAGCGATC GCCGCATCAGAAACCATCTCATTTTTCCAAGCCATCCAAGCCAGCCTCAGAAAACTAGAAGGAAGTGGTGATAGTGGTGG ACTCAGCAACCAAGACATCGAAACCGCCATCCGTCAAGTCGTAGATCAAGCCTTGGTATCCGATGCCGTGATTAACATCT TTGATGAAGCAGGTATTAAAAATCCTGACATCTCCATCATCTCCGATGAATTTATGGCAGAAGTGCGGGGCATGGAACAC CAAAACCTCGCGGTGGAACTGCTGCAAAAACTACTCAAGGATGAAGTTAAAACCCGCAGTCGCACAAATATTGTCCAAAG TCGTAAACTCTCAGAAATGTTGGAAGATGCCCTACGCCGCTATCGCAACCAAGTGATCAGCGTTACGGATATTTTAGAAG AACTGCTGGAACTAGCAAAAGATACCAAAGCTGCCAACGCCAGGGGTGAAGAACTGGGACTAGAACCCTATGAACTGGCC TTCCTTTTATGA Protein sequence : MKYLTEDEIEQYQLQLLQNLGYSYSNGYDIQPEGIKQERESFGEVILKHRLPQAISRINPTIPHDAQYQAQREIFNIASS DLLNNNEIFHKYLTEGITVEYQKNGETRGEPVKLIDWEHPENNEFLAVNQFTVIEDNHNHRPDIVLFINGLPLVVIELKN AANKKANLNAAYNQLQTYKRRIPSLFTYNALLVISDGLSARAGSLTAGFNRFSTWKNPTGENQINELEILTNGLLNKQTL LDLIRHFTVFEKSKTEDLKTGIVSITTIKKIAAYHQYYAVNKAVESIINASSQEGARKGGVLWHTQGSGKSLSMVFLAGK LVLNENLQNPTIVMLTDRNDLDDQLFDTFAGCQQLLRQDPQQAGDREQVRQLLNTNSGGIIFTTVQKFSPADGETLYPQI SPRPNIIVLADEAHRSQYGFTAKQVNVLDAEGNVIGKRTKYGFAKYIRQALPNATFVGFTGTPVEQTDKNTPAIFGEYID IYDISQAVKDGATVPIYYESRLVQVDLDAAGRQLLDELDEDLSFEDLSTTQKAKAKQTKLEAIVGSTKRIRQIAQDIVTH FEARQQVNKGKAMIVTMSRQIAVNLYDAIIQLRPDWHSEDLNLGKIKVVITTSAADEGNLVKHHTSKAQRQNLAQRLKDP ENSLELAIVCDMWLTGFDAPCLHTMYIDKPLKSHNLMQAIARINRVYFEKTGGLIVDYLGLATELKKALSFYSQSGGKGD LTLNQEVAVGLLLAKLEIVEQIISGFTYQHYFEADTGEKLNILKNATNYVAAPNIKDRFLSEVIALSKAHSLAVPHPQAI AASETISFFQAIQASLRKLEGSGDSGGLSNQDIETAIRQVVDQALVSDAVINIFDEAGIKNPDISIISDEFMAEVRGMEH QNLAVELLQKLLKDEVKTRSRTNIVQSRKLSEMLEDALRRYRNQVISVTDILEELLELAKDTKAANARGEELGLEPYELA FLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 47 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 47 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 47 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 45 |
