Gene Information

Name : alr4282 (alr4282)
Accession : NP_488322.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5135581 - 5136411 bp
Length : 831 bp
Strand : +
Note : heterocyst specific ABC-transporter, ATP-binding subunit DevA homolog

DNA sequence : 
GTGCCAAATCTCCTCATACCAATTCAAAATTCAAAATTAGGAAAACCAAACGGAATAAGGGTATGTCCGTATGTATCTGT
CGCATTCTGTTTTCAAATTGGTATCATTAAATCACTCATGCAAACTATTAACACTTCCGAACCTGTGATTTCTATTCAAA
ATCTTGACCATTACTTTGGTAGTGGACAACTCCGAAAACAGGTTTTATTTAATATTAACCTCGAAATTAATGCAGGCGAA
ATTGTGATTATGACAGGGCCTTCTGGTTCTGGAAAAACTACCCTACTAACTTTAGTTGGTGGTTTGCGTTCTGCCCAGTC
TGGGAATTTGCGGATATTAGGAAGAGAACTTACTGGTGCTAGTAGTAAACAATTAACTCAAGCAAGACGTAACAACGGTT
ATATATTCCAAGCACATAACCTGCATGGTAGCCTAACAGCACTGCAAAATGTGCGGATGGGTTTGGAGTTGCAACCAGGA
ATTTCCACCCAGGAAATGCTCACTCGCTCAACAGAAATGTTAGAAGAAGTCGGATTAGGAAATCGGCTGAACTATTACCC
TGATAACTTATCGGGAGGACAAAAACAAAGGGTAGCGATCGCCCGTGCGTTAGTCAGTCAGCCTAAAATAGTCTTAGCCG
ATGAACCTACAGCCGCACTAGATAAACAATCAGGGCGCGATGTCGTAGAATTAATGCAAAAATTAGCCAAAGAGCATCAC
TGCACAATTCTGCTAGTTACCCACGACAACCGCATTTTAGACATAGCCGATCGCATTGTCTACATGGAAGATGGTCATCT
TGTCAGGGATGCGGTGAGTGTTAATAGTTAA

Protein sequence : 
MPNLLIPIQNSKLGKPNGIRVCPYVSVAFCFQIGIIKSLMQTINTSEPVISIQNLDHYFGSGQLRKQVLFNINLEINAGE
IVIMTGPSGSGKTTLLTLVGGLRSAQSGNLRILGRELTGASSKQLTQARRNNGYIFQAHNLHGSLTALQNVRMGLELQPG
ISTQEMLTRSTEMLEEVGLGNRLNYYPDNLSGGQKQRVAIARALVSQPKIVLADEPTAALDKQSGRDVVELMQKLAKEHH
CTILLVTHDNRILDIADRIVYMEDGHLVRDAVSVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alr4282 NP_488322.1 hypothetical protein NC_012469.1.7685735. Protein 5e-27 44
alr4282 NP_488322.1 hypothetical protein NC_012469.1.7686878. Protein 4e-25 43
alr4282 NP_488322.1 hypothetical protein NC_008702.1.4606598. Protein 2e-26 43