Gene Information

Name : all4008 (all4008)
Accession : NP_488048.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 4827144 - 4828913 bp
Length : 1770 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCAATTAAGAGATTCTGTACGCCGGACAAAAATCGTCGCTACAATTGGCCCTGCCACTAGTAGCCCCGAAATGCTGAA
AGCCATCATTGAAGCGGGTGCAACAACGCTGCGACTCAACTTTTCCCACGGTTCCCACGCCGACCATCAGCGTAGTATTC
GCCTAATTCGGCAAACCGCTTTTGAACTAAATCAGCCAGTGGCAATTCTCCAAGATTTGCAAGGGCCAAAAATTCGCTTG
GGAAAGTTTGAAAACGGGTCTATAGTTTTAGCTAAAGGCGATCGCTTCACCTTAACAAATCGCCCAGTTGTTGGTAGTCA
AGAAATTAGCTGTGTCACCTACGATTATTTGGCAGATGAGGTCCCTGTAGGTGCAAAAATCCTCCTGGATGATGGCCGTG
TAGAAATGGTGGTAGAGGATATCAACCGCGACAAAGGGGATTTGAACTGTCGGGTGACTGTAGCAGGTAAGTTATCTAAT
AACAAAGGTGTTAACTTTCCTGGCGTTTATCTCTCAATTAAAGCCATGACCGACAAAGATCGTGAGGATCTGATGTTTGG
TCTAGATCAGGGTGTTGATTGGGTAGCCCTTTCCTTTGTCCGCAATCCGCAAGACATCATTGAAATTAAAGAGCTAATTT
CCAGCACTGGTAAACAAGTGCCGGTAGTTGCCAAAATAGAAAAGCATGAAGCGATCGAACAAATGGAAGCAGTTCTCGCT
TTATGTGATGGCGTAATGGTGGCTAGAGGCGATTTAGGTGTAGAACTACCAGCAGAAGATGTCCCCGTACTACAAAAGCG
CTTAATTGCCACAGCAAACCGCTTGGGGATTCCCATCATCACTGCTACTCAAATGTTAGATAGCATGGTGAGCAATCCCC
GTCCCACCCGCGCGGAAGTGTCCGATGTAGCCAATGCCATTCTTGATGGTACAGATGCGGTCATGCTCTCCAATGAAACG
GCTGTGGGTAGCTACCCAGTGGAAGCAGTGGCGACAATGGCAAGAATTGCCGAACGCATCGAGCAGGAAGAAGCTATGGC
TAGTAAATTACGCCAAATGCGAGATAACCGCCGTTCTATTCCCAACGCCATCAGCCAAGCTGTAGGTCAAATTGCTGAAC
AGTTGGGAGCAGCAGCAATTATGACTCTCACCCAAACAGGGGCGACTGCACGCAACGTTTCCAAATTCCGCCCCCAAACA
CCAATCTTGGCAGTAACACCCCACGTTAACGTAGCTCGTCAACTACAAATGGTGTGGGGCGTAAAACCTTTGTTGGTCTT
AGAATTACCTTCCACTGGTCAAACTTTCCAAGCCGCCATTAACGTCGCCCAAGAGCATAGTTTACTGTTTGAAGGTGATT
TAGTCGTGATGACAGCCGGGACGTTACAAGGGGTATCTGGCTCAACGGACTTGATTAAAGTTGAAGTGGTAACGGCAGTT
CTAGGACAGGGAATTGGTCTAGGACAGGGTTTGGTAAGCGGTTGTGCTAGGGTTGCTCACACCGGGATGGATGTGGGGAA
CTTTAACGCTGGTGATATTTTGGTTGCACCCCGCACAGGTGCAGATTTTGTCGAGGCGATTCGCAAAGCCGGCGGGATTA
TTACAGAGGATGAAAGTTTAACTAGTCATGCGGCGGTGATTGGTTTACGCCTGGGTGTGCCGGTGATTGTAGGTGTGAAG
AAAGCCACGCAAGTTATCCGTGATGGAGCAATTTTGACTCTGGATTTGCAACGAGGTTTAGTTTATTCCGGAGCAGTAGG
AACTCCTTAA

Protein sequence :
MQLRDSVRRTKIVATIGPATSSPEMLKAIIEAGATTLRLNFSHGSHADHQRSIRLIRQTAFELNQPVAILQDLQGPKIRL
GKFENGSIVLAKGDRFTLTNRPVVGSQEISCVTYDYLADEVPVGAKILLDDGRVEMVVEDINRDKGDLNCRVTVAGKLSN
NKGVNFPGVYLSIKAMTDKDREDLMFGLDQGVDWVALSFVRNPQDIIEIKELISSTGKQVPVVAKIEKHEAIEQMEAVLA
LCDGVMVARGDLGVELPAEDVPVLQKRLIATANRLGIPIITATQMLDSMVSNPRPTRAEVSDVANAILDGTDAVMLSNET
AVGSYPVEAVATMARIAERIEQEEAMASKLRQMRDNRRSIPNAISQAVGQIAEQLGAAAIMTLTQTGATARNVSKFRPQT
PILAVTPHVNVARQLQMVWGVKPLLVLELPSTGQTFQAAINVAQEHSLLFEGDLVVMTAGTLQGVSGSTDLIKVEVVTAV
LGQGIGLGQGLVSGCARVAHTGMDVGNFNAGDILVAPRTGADFVEAIRKAGGIITEDESLTSHAAVIGLRLGVPVIVGVK
KATQVIRDGAILTLDLQRGLVYSGAVGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-84 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-84 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-84 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-84 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
all4008 NP_488048.1 pyruvate kinase VFG0479 Protein 6e-85 45