Gene Information

Name : all3575 (all3575)
Accession : NP_487615.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 4318673 - 4319470 bp
Length : 798 bp
Strand : -
Note : ORF_ID:all3575

DNA sequence : 
ATGCAAATTGCGAACTTTTCCTTAGCAACTAATTCCATGCGGGAACCAGTGGATACCTCAACAGCAACAGCAGCAATTAA
TATCTCCCATCTAGGGGTACACTACCGTACACAAGAAGCCTTGCGGGATGTTAACTGTATTGTCAAACCGGGACGAATCA
CGGGAATATTTGGCCCTAACGGCGCTGGTAAAAGCACTCTTATGAAAGCAATGTTAGGCTTGGTTCCCGTTAGCAGTGGT
AGGGTACTATACCAGAACAAACCCCTCATGCAGCAATTAGGGAAAGTTGCTTACGTTCCCCAACGTAGCCAAATTGACTG
GACTTATCCCGCCACAGTTTGGGATGTGGTGATGATGGGAAGGGTAAAAAAGACAGGCTGGTTACGTAGTTTCTCGGCTG
TGAGTCGCCAAGTTGCCAAGAATGCCTTAGAACGAGTGGGAATGTTGGATTATTGCGATCGCCCCATAGGACAATTATCC
GGGGGACAACAACAACGGGTATTTTTAGCGAGGGCTTTAGCACAACAAGCAGACATATTCTGTTTTGATGAACCCTTGGT
AGGTATCGATCAAAAAACCCAAGCAGTTATTTTTGAGGTTTTCCATGAACTAGCTGCGGCTAACAAAATTGTATTGGTAG
TTAACCACGACTTAGGCGAATCTATCAGCCATTTCGATGATTTAGTCTTGCTTAACCGTGAATTAATCGCCACAGGTTCC
CGTCAACAAGTACTCACAGAAGACAACCTGCACCAAGCTTACGGCGGTAAAGTCATCTACTTCTCTGATGCAGCTTAA

Protein sequence : 
MQIANFSLATNSMREPVDTSTATAAINISHLGVHYRTQEALRDVNCIVKPGRITGIFGPNGAGKSTLMKAMLGLVPVSSG
RVLYQNKPLMQQLGKVAYVPQRSQIDWTYPATVWDVVMMGRVKKTGWLRSFSAVSRQVAKNALERVGMLDYCDRPIGQLS
GGQQQRVFLARALAQQADIFCFDEPLVGIDQKTQAVIFEVFHELAAANKIVLVVNHDLGESISHFDDLVLLNRELIATGS
RQQVLTEDNLHQAYGGKVIYFSDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-40 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 9e-41 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-40 42
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-40 42
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-40 42
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-41 42
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
all3575 NP_487615.1 ABC transporter ATP-binding protein BAC0400 Protein 1e-45 44
all3575 NP_487615.1 ABC transporter ATP-binding protein BAC0350 Protein 5e-41 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
all3575 NP_487615.1 ABC transporter ATP-binding protein VFG0526 Protein 4e-41 42