Gene Information

Name : glnA (alr2328)
Accession : NP_486368.1
Strain : Nostoc sp. PCC 7120
Genome accession: NC_003272
Putative virulence/resistance : Virulence
Product : glutamate--ammonia ligase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 2807483 - 2808907 bp
Length : 1425 bp
Strand : +
Note : ORF_ID:alr2328

DNA sequence :
ATGACAACCCCACAAGAAGTCTTGAAAAGAATTCAAGATGAAAAAATTGAGCTGATTGACCTCAAGTTCATCGATACAGT
AGGTACATGGCAGCACCTCACCTTGTACCAAAACCAAATCGATGAAAGCTCATTCTCTGATGGCGTACCTTTTGATGGTT
CCAGCATCCGGGGTTGGAAAGCAATCAACGAGTCAGACATGACAATGGTTCTCGATCCCAACACTGCTTGGATCGACCCA
TTCATGGAAGTGCCAACACTAAGTATTGTTTGTAGCATTAAAGAACCACGCACAGGAGAATGGTACAACCGTTGTCCACG
GGTTATTGCTCAAAAAGCAATAGACTACTTAGTATCTACGGGTATTGGTGATACAGCCTTCTTTGGCCCTGAAGCTGAAT
TTTTTATCTTTGATAGCGCCCGCTTTGCCCAAAACGCTAACGAAGGTTACTACTTCCTCGACTCTGTAGAGGGTGCTTGG
AATTCTGGTAAAGAAGGTACAGCAGATAAACCCAACTTGGCTTACAAACCACGTTTTAAAGAGGGTTATTTCCCTGTTTC
CCCCACAGATTCTTTCCAAGACATCCGGACAGAAATGTTGTTGACGATGGCGAAATTAGGCGTACCCATCGAAAAACATC
ACCACGAAGTTGCTACTGGTGGTCAGTGCGAGCTAGGCTTCCGCTTTGGTAAGTTAATCGAAGCTGCTGACTGGCTGATG
ATTTACAAATATGTCATCAAGAACGTTGCCAAAAAATATGGCAAAACCGTCACCTTCATGCCAAAACCAATTTTTGGTGA
TAACGGTTCTGGTATGCACTGTCACCAATCTATCTGGAAGGATGGCAAACCTCTCTTCGCAGGTGATCAGTATGCTGGCT
TAAGTGAAATGGGACTGTACTACATTGGTGGTCTTCTCAAGCACGCCCCAGCACTGTTGGCAATCACCAACCCCAGCACC
AACTCTTACAAGCGTCTAGTTCCTGGTTATGAAGCACCAGTTAACTTGGCTTACTCCCAAGGAAACCGTTCTGCTTCCAT
CCGTATTCCTCTGTCTGGCACTAACCCCAAAGCCAAGCGTTTAGAGTTCCGTTGTCCAGATGCTACCTCTAACCCTTATT
TGGCATTTGCTGCCATGCTGTGCGCTGGTATCGATGGTATCAAGAACAAAATTCATCCTGGTGAGCCATTAGATAAAAAC
ATCTATGAACTTTCTCCAGAAGAATTGGCAAAAGTTCCTTCCACACCTGGTTCTTTAGAACTAGCATTGGAAGCGCTAGA
AAACGACCACGCTTTCTTAACAGATACAGGCGTATTCACCGAAGACTTTATCCAAAACTGGATTGACTACAAACTAGCTA
ACGAAGTTAAACAGATGCAACTGCGTCCTCATCCTTATGAGTTCTCTATCTATTACGACGTTTAA

Protein sequence :
MTTPQEVLKRIQDEKIELIDLKFIDTVGTWQHLTLYQNQIDESSFSDGVPFDGSSIRGWKAINESDMTMVLDPNTAWIDP
FMEVPTLSIVCSIKEPRTGEWYNRCPRVIAQKAIDYLVSTGIGDTAFFGPEAEFFIFDSARFAQNANEGYYFLDSVEGAW
NSGKEGTADKPNLAYKPRFKEGYFPVSPTDSFQDIRTEMLLTMAKLGVPIEKHHHEVATGGQCELGFRFGKLIEAADWLM
IYKYVIKNVAKKYGKTVTFMPKPIFGDNGSGMHCHQSIWKDGKPLFAGDQYAGLSEMGLYYIGGLLKHAPALLAITNPST
NSYKRLVPGYEAPVNLAYSQGNRSASIRIPLSGTNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNKIHPGEPLDKN
IYELSPEELAKVPSTPGSLELALEALENDHAFLTDTGVFTEDFIQNWIDYKLANEVKQMQLRPHPYEFSIYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-96 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_486368.1 glutamate--ammonia ligase VFG1399 Protein 5e-132 58