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Name : kdpB (BF0529) Accession : YP_210242.1 Strain : Bacteroides fragilis NCTC 9343 Genome accession: NC_003228 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 621772 - 623820 bp Length : 2049 bp Strand : + Note : Similar to Clostridium acetobutylicum potassium-transporting ATPase B chain KdpB or CAC3681 SWALL:ATKB_CLOAB (SWALL:O32328) (685 aa) fasta scores: E(): 8.4e-145, 60.29% id in 685 aa, and to Bacteroides thetaiotaomicron K+-transporting ATPase B chain BT242 DNA sequence : ATGAAAAATAAGATGTCAGCTTCTATGTTTCAAAAGGAGCAAGTAATAGAAAGTATCAGGCAGTCGTTTGTGAAGTTGAA TCCGCGAATGATGATAAAGAACCCGATTATGTTTACGGTAGAAGTGGTTACCGTTATTATGCTGGTGGTAACGTTACTCT CTCTCTTCACTCCGGAATATGGTACTTTCGGATATAATTTGTGTGTGTTCTTAATTTTGTTTGTGACCTTGTTGTTTGCC AATTTTGCTGAAGCAATAGCCGAAGCCCGTGGTAAAGCACAAGCCGACAGCTTACGCAAAACGCGTGAAGAGACTCCTGC TAAACTGGTAATAGGAGACAAGGTTCAGACCGTAAGTAGTTCTAAACTGAAAAAGGGGGATGTTTTTGTTTGTGAAGCCG GTGATACGATCCCTGCCGATGGAGAGATTATTGAAGGATTGGCTTCCATTGACGAAAGTGCCATTACCGGTGAATCTGCT CCGGTGATCCGTGAGGCGGGTGGAGATAAAAGCTCTGTGACCGGTGGTACCAAAGTGCTTTCAGATCATATCAAGGTATT GGTCACACAGCAACCGGGCGAAAGCTTTCTTGACAAAATGATTGCGTTGGTCGAAGGCGCAAGCAGGCAGAAGACGCCGA ACGAGATAGCCCTGACCATTTTGTTGGCAGGCTTTACACTGGTCTTTGTCATCGTATGTGTTACTCTGATCCCGTTTGCT GACTATACCAGTCTTGAACATCCGGGAACAGCTATCTCGATTGCAGCCATCCTCTCTCTGTTTGTCTGTTTGATTCCGAC TACTATCGGAGGATTACTTTCTGCCATCGGTATTGCCGGTATGGATCGTGCATTGCGTGCCAATGTGATTACAAAGTCGG GTAAAGCGGTGGAGACGGCAGGAGATATCGATACACTGTTGCTTGATAAAACCGGTACTATTACGATTGGTAACCGCAGG GCAACGAAATTCCATTCGGCACCGGGAGTCGGTCCGCGGGAGTTTGTAACAACCTGTCTGTTGGCTTCGCTTTCGGACGA GACGCCCGAGGGTAAATCTATTGTAGAGTTAGGACGTGAATCGGGGGTACGGATGCGGAGTCTTCAGACGGCCGGTGCCC GGATGATTCAGTTTACGGCTGAAACCAAATGTTCGGGTGTTGATCTGGCCGATGGCACACAGATACGTAAAGGAGCGTTC GATGCGATCCGTAAGATTACGGAAGCAGCTGGGAATAAATTCCCGAAAGAAATAGAAGAAGTGATCAGTGAGATCTCTGG TAATGGAGGTACACCGCTGGTAGTGTGTGTCGACCGGAAGGTGACCGGGGTTATCGAGTTGCAGGATATTATAAAACCGG GCATTCAGGAACGTTTTGAACGTCTGCGCAAGATGGGAGTGAAGACAGTGATGGTAACCGGTGACAATCCTTTGACCGCC AAGTACATTGCCGAAAAGGCGGGGGTGGACGACTTTATAGCTGAGGCAAAGCCTGAAGACAAGATGGAATACATCCGTAA AGAACAACAGTCCGGTAAGTTGGTGGCGATGATGGGAGACGGAACGAATGATGCTCCTGCATTGGCGCAGGCAAATGTCG GTGTGGCAATGAATAGCGGTACGCAGGCAGCCAAGGAGGCCGGCAATATGGTCGACCTCGATAATGACCCAACTAAATTG ATAGAGATTGTGGAAATCGGAAAGCAGTTGCTGATGACTCGTGGAACCCTGACTACTTTCTCTATTGCCAACGATGTGGC AAAATACTTTGCCATTGTACCTGCTTTGTTTATGGTGGCCATTCCAGAGTTGGGTGCACTCAATATTATGAATCTGCATA GTCCGGAAAGTGCTATACTCTCTGCTGTCATATTCAATGCCATCATTATCCCGATCCTGATACCATTGGCGCTGAAAGGA GTACAATATAAACCGATCGGTGCATCGGCTTTGCTCCGTCGGAACCTTTTAATCTATGGGTTAGGAGGAGTGATCGTTCC CTTTGTCGGAATCAAGTTAATCGATTTGGTTGTCAGTTTATTCTTTTAA Protein sequence : MKNKMSASMFQKEQVIESIRQSFVKLNPRMMIKNPIMFTVEVVTVIMLVVTLLSLFTPEYGTFGYNLCVFLILFVTLLFA NFAEAIAEARGKAQADSLRKTREETPAKLVIGDKVQTVSSSKLKKGDVFVCEAGDTIPADGEIIEGLASIDESAITGESA PVIREAGGDKSSVTGGTKVLSDHIKVLVTQQPGESFLDKMIALVEGASRQKTPNEIALTILLAGFTLVFVIVCVTLIPFA DYTSLEHPGTAISIAAILSLFVCLIPTTIGGLLSAIGIAGMDRALRANVITKSGKAVETAGDIDTLLLDKTGTITIGNRR ATKFHSAPGVGPREFVTTCLLASLSDETPEGKSIVELGRESGVRMRSLQTAGARMIQFTAETKCSGVDLADGTQIRKGAF DAIRKITEAAGNKFPKEIEEVISEISGNGGTPLVVCVDRKVTGVIELQDIIKPGIQERFERLRKMGVKTVMVTGDNPLTA KYIAEKAGVDDFIAEAKPEDKMEYIRKEQQSGKLVAMMGDGTNDAPALAQANVGVAMNSGTQAAKEAGNMVDLDNDPTKL IEIVEIGKQLLMTRGTLTTFSIANDVAKYFAIVPALFMVAIPELGALNIMNLHSPESAILSAVIFNAIIIPILIPLALKG VQYKPIGASALLRRNLLIYGLGGVIVPFVGIKLIDLVVSLFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 6e-142 | 55 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-154 | 55 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-154 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-140 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-140 | 54 |
