Gene Information

Name : tpx (BF2777)
Accession : YP_212393.1
Strain : Bacteroides fragilis NCTC 9343
Genome accession: NC_003228
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 3236634 - 3237134 bp
Length : 501 bp
Strand : -
Note : Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Shigella flexneri, and Shigella dysenteriae thiol peroxidase Tpx or B1324 or C1796 or Z2452 or ECS1903 or SF1330 or S1413 SWALL:TPX_ECOLI (SWALL:P37901) (167 aa) fasta scores: E()

DNA sequence : 
ATGGCAACAACAAATTTCAAAGGACAACCGGTAAAGCTGATTGGCGAATTTATACAGGTTGGAAAGGTGGCTCCCGATTT
CGAGCTGGTGAAAAGTGATTTATCTTCTTTCGCACTAAAAGATCTGAAAGGTAAGAATATTGTTCTGAATATTTTCCCGA
GTCTGGATACCGGTGTGTGCGCCACTTCGGTGCGTAAATTCAATAAAATGGCAGCCGGAATGAAGGATACCGTGGTATTG
GCCATTTCGAAAGACTTGCCGTTTGCGCAGGGACGCTTCTGCACGACAGAGGGTATCGAAAACGTGATTCCGTTGTCGGA
TTTCCGCTTTTCGGACTTCGACGAGAGCTATGGCGTGAGGATGGCTGACGGACCGCTGGCCGGACTGCTGGCGCGTGCGG
TAGTGGTGATTGGGAAAGACGGGAAAGTAGCTTATACAGAGCTTGTGCCGGAGATTACTCAGGAGCCGGATTATGAAAAG
GCATTGGCTGCTGTGAAATAA

Protein sequence : 
MATTNFKGQPVKLIGEFIQVGKVAPDFELVKSDLSSFALKDLKGKNIVLNIFPSLDTGVCATSVRKFNKMAAGMKDTVVL
AISKDLPFAQGRFCTTEGIENVIPLSDFRFSDFDESYGVRMADGPLAGLLARAVVVIGKDGKVAYTELVPEITQEPDYEK
ALAAVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 3e-31 45
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-31 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-31 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-31 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_212393.1 thiol peroxidase VFG0087 Protein 5e-32 45