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Name : BF1928 (BF1928) Accession : YP_211561.1 Strain : Bacteroides fragilis NCTC 9343 Genome accession: NC_003228 Putative virulence/resistance : Unknown Product : RumB/ImpB like DNA repair protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2248666 - 2249949 bp Length : 1284 bp Strand : - Note : Similar to Escherichia coli DNA repair protein RumB(r391) SWALL:Q44054 (EMBL:U13633) (422 aa) fasta scores: E(): 9e-65, 45.43% id in 416 aa, and to Providencia rettgeri RumB SWALL:Q8RL27 (EMBL:AY090559) (435 aa) fasta scores: E(): 9.3e-65, 45.43% id in 41 DNA sequence : ATGTTTGGACTAATGGACTGCAATAACTTCTACGCAAGTTGCGAGAGAGTGTTCAATCCGGCTTTGAACGGTAAGCCGAT CGTTGTTTTAAGTAATAACGACGGATGTGTTATTGCCAGAAGTAACGAAGCGAAAGCATTGGGGATTAAAATGGGAGTTC CGGCTTATCAGATCAAAGATGATATTCAGAAATATGGTATATCTGTCTTTTCATCGAACTATACGCTATACGGCGGCATG TCCGGACGCGTGATGTCCATACTGGCAGAACAAGTGCCGGAAATGGAAGTATACAGTATAGACGAAGCATTTCTTAACCT GGAAGGGATTCGGGATATTCAGTCACTCGGAACAGACATCATAAACAAAGTAATCCGCGGAACCGGCATACCTGTTAGTT TGGGTATCGCCCCAACCAAAACACTCGCAAAGGTCGCCAATAAATTTGCAAAGAAATATCCTGCTTACAATCGTTTATGT ATCATCGATACAGAAGAAAAGCGCACCAAGGCTCTGCAGCTTACTGAAATTGGAGACATCTGGGGGATCGGTCACCGGCA AGTTGCCAAGTTAGAAAAGCAGGGAGTCAAAACAGCCTATGACTTTACCGAGTTGCCCGAATCTTGGGTGCGTAAGAACA TGACTGTAGTCGGAGAAAGGACCTGGAAAGAACTTCAAGGCATTTCCTGTATTGATATGGAAACCACACCACCGGCCAAA AAGCAGATATGTACAAGTCGGTCATTCGGCAAGATGGTGGAGGACATCGATACAATGTCGGAAGCAATCGCCACTCACGC TTCTACATGCGCAAAGAAACTCCGACAACAGAAAGGCTATGCAATGTCACTAATGGTATTCATCCATACAAATAACTTCC GTAAAGATTCACCACAATATTGGAGGAATACAGTTGTACATCTTCCAGTACCGACCAATGACACATTAGAAATTGTACAT TATGCACTGGCCGGGCTAAAAACGATTTTCATGCAAGGCTATCAATATAAGAAAGCCGGAGTTATTATCACCGAAATAAC CGATAGCACCCAATTGGGACTGTTTGATTCAGTAGATCGCGAGAAACGTAAACGTCTTCAACAAACAATAGATAAGATAA ACGGTAAACACAGCCGACTCGTCAAATTAGCGATTCAAGGTACAGGGAGGAATTGGAAGCTTAAACAAAAACAGCTATCA GGGCATTATACCACTGACATCAATCAGATTATAAGCATTAATTGTACTTACCCAACTGCATGTCAACGAAAACAATATAG CTGA Protein sequence : MFGLMDCNNFYASCERVFNPALNGKPIVVLSNNDGCVIARSNEAKALGIKMGVPAYQIKDDIQKYGISVFSSNYTLYGGM SGRVMSILAEQVPEMEVYSIDEAFLNLEGIRDIQSLGTDIINKVIRGTGIPVSLGIAPTKTLAKVANKFAKKYPAYNRLC IIDTEEKRTKALQLTEIGDIWGIGHRQVAKLEKQGVKTAYDFTELPESWVRKNMTVVGERTWKELQGISCIDMETTPPAK KQICTSRSFGKMVEDIDTMSEAIATHASTCAKKLRQQKGYAMSLMVFIHTNNFRKDSPQYWRNTVVHLPVPTNDTLEIVH YALAGLKTIFMQGYQYKKAGVIITEITDSTQLGLFDSVDREKRKRLQQTIDKINGKHSRLVKLAIQGTGRNWKLKQKQLS GHYTTDINQIISINCTYPTACQRKQYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 1e-70 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 1e-70 | 43 |
