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Name : wcfX (BF1903) Accession : YP_211537.1 Strain : Bacteroides fragilis NCTC 9343 Genome accession: NC_003228 Putative virulence/resistance : Virulence Product : LPS biosynthesis UDP-glucuronic acid epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 2221689 - 2222741 bp Length : 1053 bp Strand : + Note : Identical to previously sequenced to Bacteroides fragilis UDP-glucuronic acid epimerase WcfX SWALL:Q9F759 (EMBL:AF285774) (350 aa) fasta scores: E(): 6e-139, 100% id in 350 aa, and similar to Escherichia coli WbnF SWALL:Q9RP53 (EMBL:AF172324) (334 aa) fas DNA sequence : ATGAATGTGTTAGTAACCGGTGCTGCCGGATTTATAGGTTCGCATGTTTGTAAGCGTCTTTTGCAACGTGGGGATGAAGT TGTGGGCTTGGATAATATTAATTCGTATTATGATATTAATTTAAAGTATGGACGCCTTTCGAGCTTAGGTGTTCCTCAAT CTGAACTGTCATGGTATAAGTTCACACGGAGTAATGTTTATCCTCGATTTAGTTTTGTGCGGATGAACCTCGAGGATAGG CAGGCTATGCAAATGCTGTTTGCTAATGGAAATTTTGATGTAGTAATCAATTTGGCCGCACAAGCGGGAGTGCGCTACTC CATTGAGAATCCATATGCTTATGTTGAAAGTAATATAGACGGTTTTCTGAATGTTCTCGAGGGTTGTCGTCACAGTCAGG TGAAACATTTGGTTTATGCCAGTTCCAGTAGTGTATATGGTTTGAATGGACAGGTTCCTTTTTCAGAGAAAGATGGCATA GCCCATCCGGTGAGTCTGTATGCCGCAACCAAGAAGTCGAATGAACTTATGGCACATACTTATAGCCATTTATATAATAT ACCTTCTACGGGTCTTCGTTTCTTCACGGTATATGGTCCCTGGGGTAGACCGGATATGTCTCCTTTTCTATTTGCGGATG CTATCTTGCATGGTCGCCCCATCAAGGTCTTTAACAATGGCAACATGCTTCGTGATTTTACATATATAGATGACATTGTG GAAGGTGTCTTGAGAGTGGCTGATTCTATTCCGGAAGGGAATCAGTGCTGGGATGCTGAGGTTGCGGATCCAAGCATGTC CTGTGCTCCCTATAAGATTTATAATATTGGTAATTCCCGTCCTGTAAAATTGATGGATTTTATACGTGCTATAGAAATGT CAATCGGGAGGGAAGCTGACAAGATCTATCTTCCGATGCAGCCCGGGGATGTGTATCAGACCTATGCGGATACTTCTTCT CTTTCGCGGGAAATTGGTTTTCAACCCAATACGTCCTTGGAGGCGGGCGTTAAGAAAACAATAAGTTGGTATAAAGAATT TTATAATCTATAA Protein sequence : MNVLVTGAAGFIGSHVCKRLLQRGDEVVGLDNINSYYDINLKYGRLSSLGVPQSELSWYKFTRSNVYPRFSFVRMNLEDR QAMQMLFANGNFDVVINLAAQAGVRYSIENPYAYVESNIDGFLNVLEGCRHSQVKHLVYASSSSVYGLNGQVPFSEKDGI AHPVSLYAATKKSNELMAHTYSHLYNIPSTGLRFFTVYGPWGRPDMSPFLFADAILHGRPIKVFNNGNMLRDFTYIDDIV EGVLRVADSIPEGNQCWDAEVADPSMSCAPYKIYNIGNSRPVKLMDFIRAIEMSIGREADKIYLPMQPGDVYQTYADTSS LSREIGFQPNTSLEAGVKKTISWYKEFYNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-93 | 54 |
