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Name : BF1871 (BF1871) Accession : YP_211506.1 Strain : Bacteroides fragilis NCTC 9343 Genome accession: NC_003228 Putative virulence/resistance : Unknown Product : RNA-binding protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2183028 - 2185151 bp Length : 2124 bp Strand : - Note : Similar to Neisseria meningitidis hypothetical protein NMB0075 SWALL:YHGF_NEIMB (SWALL:Q51152) (757 aa) fasta scores: E(): 2.9e-115, 47.95% id in 709 aa, and to Bacteroides thetaiotaomicron RNA binding protein with S1 RNA-binding domain BT1238 SWALL:AAO76 DNA sequence : ATGGAAATTTTTCACAAAATGATTTCGGCAGCACTCAACCTGCCGGAAAAGCAGATCAGTAATACTCTCGGGCTGTTAGC CGAGGGAGCCACTATCCCTTTCATCAGCCGCTACCGTAAAGAAATCACCGGCGGACTCGACGAAGTGCAGATAGAATCTA TCAAAACGCAGTACGATAAACTCTCAGAACTCGCCAAACGCAAAGAGACCATTCTCGGCACCATCGGCGAGCAAGGCAAA CTGACGCCTGAGTTGCGGCAACGCATCGATGCCACCTGGGATGCCACCGCTCTTGAAGATATCTACCTGCCCTACAAGCC TAAACGCAAGACCCGCGCCGAAGCTGCCCGCCAGAAAGGACTCGAACCTCTGGCTCTGCTACTGATGATGCAGCGCGAGA ACAACCTGGGCTCCCGTATTCCTGCGTTCGTCAAAGGCGATGTCAAAGACGCAGAGGATGCTCTGAAAGGTGCCCGCGAC ATTATCGCCGAGCAGATGAGCGAAGACGAACGTGCCCGTAATGCAGTGCGTAATCTCTTTGCCCGCCAGGCTGTCATCAG CGCTAAAGTAGTGAAGGGTAAAGACGAAGAGGCCGCCAAATACCGGGACTATTTCGACTTCTCTTCTCCCTTGAAACGCT GCACCTCCCATCGCCTGCTGGCCATCCGCCGTGCCGAGGCCGAAGGTTTGCTGAAAGTCAGCATTACCCCCGACGATGAC GAATGCCTCGAACGGCTCGACCGCCAGTTTGTCCGTAGCAATAACGAATGTGGCCGCCAGGTGGCAGAAGCCGTACAGGA TGCCTACCGCCGTCTGCTGAAACCTTCCATCGAAACCGAATTTGCCTCCCTCAGTAAAGAACAGGCCGATGACGAAGCGA TCCGGGTCTTTGCCGAAAACCTGCGCCAACTGCTTCTTGCCCCACCCTTGGGACAAAAACGGGTAATGGGTATCGATCCC GGCTTTCGCACCGGTTGTAAGGTGGTCTGCCTCGATGCACAAGGCAATCTCGTACACAATGAAAACATCTATCCTCACCC GCCGGTAGACAAGAAAACCGAAGCGGCTTCGAAACTCCGCAAAATGATTGAAGCTTACAAGATAGAGGCCATCGCCATCG GTAACGGAACTGCCAGCCGCGAAACGGAAAATTTCGTCACGCACCAACAGTTCGACCGTCCCGTGCAGGTGTTTGTTGTC AGTGAACAGGGTGCTTCCATCTACTCGGCCTCCAAAACGGCCCGTGACGAGTTTCCCGATTATGATGTCACCGTCCGTGG GGCCGTCTCCATCGCTCGCCGGCTGATGGATCCGCTGGCGGAACTGGTCAAGATCGATCCTAAGTCCATCGGTGTCGGCC AATACCAGCATGATGTAGACCAGACCAAATTGAAAAAATCACTCGACCAGACAGTGGAGAACTGTGTCAACCAGGTAGGT GTCAATCTCAACACAGCCAGCAGTCATCTGCTCACCTACATTTCCGGTCTGGGTCCGCAACTGGCACAGAACATTGTAGC CTACCGCGCTGCCAACGGTGCCTTTGCCTCACGTAAAGAGTTGATGAAAGTGCCCCGCATGGGAGCTAAAGCTTTTGAAC AATGCGCCGGATTCCTCCGTATCGCCGGAGGAGAGAATCCGTTGGACAACACCGCTGTGCATCCCGAAAGTTATGGGATC GTGCAACAGATGGCCAAAGATCTGTCATGTACTGTTCCTCAACTGATTGCCGACAAATCGTTGCGTACCCGTATCGAAAT GGAAAAGTATATCACCCCCACCGTAGGACTCCCTACCTTGAAGGATATTCTGCAAGAGCTCGACAAACCGGGACGCGACC CGCGCGATACCATTCAGGTATTTGAGTTCGACCGTAACGTGCGCACCATCAACGACCTCCGCGAAGGGATGACTCTACCC GGTATTGTCAGCAACATCACCAACTTCGGAGCTTTTGTCGATATAGGCATCAAGGAGAACGGGCTTGTCCATCTCTCCCA GCTTGCCAACCGATTCATCACCGATCCCACCGAAGTGGTCTCCATTCACCAACACGTCACGGTGAAAGTACTGAGCATAG ACCTCGAACGGAAACGGATACAGTTGACGATGAAGGAGGAGTAA Protein sequence : MEIFHKMISAALNLPEKQISNTLGLLAEGATIPFISRYRKEITGGLDEVQIESIKTQYDKLSELAKRKETILGTIGEQGK LTPELRQRIDATWDATALEDIYLPYKPKRKTRAEAARQKGLEPLALLLMMQRENNLGSRIPAFVKGDVKDAEDALKGARD IIAEQMSEDERARNAVRNLFARQAVISAKVVKGKDEEAAKYRDYFDFSSPLKRCTSHRLLAIRRAEAEGLLKVSITPDDD ECLERLDRQFVRSNNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAENLRQLLLAPPLGQKRVMGIDP GFRTGCKVVCLDAQGNLVHNENIYPHPPVDKKTEAASKLRKMIEAYKIEAIAIGNGTASRETENFVTHQQFDRPVQVFVV SEQGASIYSASKTARDEFPDYDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQYQHDVDQTKLKKSLDQTVENCVNQVG VNLNTASSHLLTYISGLGPQLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLRIAGGENPLDNTAVHPESYGI VQQMAKDLSCTVPQLIADKSLRTRIEMEKYITPTVGLPTLKDILQELDKPGRDPRDTIQVFEFDRNVRTINDLREGMTLP GIVSNITNFGAFVDIGIKENGLVHLSQLANRFITDPTEVVSIHQHVTVKVLSIDLERKRIQLTMKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-155 | 48 |
