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Name : wcfF (BF1020) Accession : YP_210707.1 Strain : Bacteroides fragilis NCTC 9343 Genome accession: NC_003228 Putative virulence/resistance : Virulence Product : UDP-glucose-6 dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 1270195 - 1271472 bp Length : 1278 bp Strand : + Note : Similar to previously sequenced Bacteroides fragilis UDP-glucose-6 dehydrogenase WcfF SWALL:Q9XDJ7 (EMBL:AF048749) (425 aa) fasta scores: E(): 4.5e-161, 100% id in 425 aa, and to Escherichia coli udp-glucose-6-dehydrogenase wbqA SWALL:AAO39690 (EMBL:AY208 DNA sequence : ATGGAAGAATTAAAGATTGCCGTAATAGGTCTTGGTTATGTTGGGCTACCTTTGGCTCGATTGTTTTCGACAAAATATGA ATGTATTGGTTTTGATCTGAACCAGTCTCGTGTTGATGCTTTAAATTCCGGTCATGATATGACTTTAGAGGTTTCTGATG ACTTACTTCGGAAAGCGTTAGAAAATGGTTTCAAATGTACCAGTAATATTGACGAAATAAGTAATTGTAACTTTTATGTT GTAGCTGTACCAACCCCTGTGGATTTGAATAATCGCCCCGATCTTACACCTTTGATTGGTGCGAGTACAACAGTCGGAAA AGTTATTTCAAAAGGGGATATTGTTGTGTATGAATCTACTGTATATCCGGGAGTAACAGAGGAAGAATGTCTTCCGGTAG TCGAAGAGGTGTCTGGGTTAACATACAATGTAGATTTTTATGCAGGTTATTCACCAGAACGTATAAACCCGGGTGATAAA GAGCATACTGTTGAAAAGATTAAGAAAGTAACTTCCGGTTCGACTCCTGAGATTGCTGACATTGTTGATTCTGTTTATAA TTCAGTGTTGGTTAACGGTACTCATAAAGCCCCTTCTATCAAAGTGGCTGAAGCTTCCAAAATAATAGAGAACTCCCAGC GCGATGTGAATATTGCCTTCATGAATGAACTCTCAAAGATCTTCAATGCAATGGGCATTGATACCAATGATGTTATTGAG GCTGCATCTTCCAAATGGAATTTTATCAAGTTGAAACCTGGCTTGGTCGGTGGTCACTGTATTAGTGTTGATCCTTATTA TCTTATTCAGAAGGCCCAGGTTTATGGGGTACTCCCACGAATCATGTCTGCAGCAAGGCGCTTGAATGATGGTATGGGAG ACTATGTCGCTAATCAGGTGATTAGATTAATGAATAAAAAAGGTATTCTTGTCAAAGATTCAAAGATTCTGCTTCTGGGT TTTACTTTTAAAGAAGATTGCCCTGATATTCGAAATACCAAGGTGATAGACATTTATTCTACCTTACATGAGTATACTTC TGACATTACCGTTTATGATGCTTGGGCTAATTCGGCTAAAGTGGCACATGAATATGGTATATCGATCCTGACTGCTGGTC TTGATAATTTGGTTGGACAATTTGATGCGGTGGTGTTGTGTGTTGGACATAAAGAGTTCCGGCATATGAATATTCGCGGC TTTCTCCGTTCTGATATGGGTGTTGTTTATGATGTTAAAGCTGTATTGAGTAAAGATATAATAGATGGCAGATTATAA Protein sequence : MEELKIAVIGLGYVGLPLARLFSTKYECIGFDLNQSRVDALNSGHDMTLEVSDDLLRKALENGFKCTSNIDEISNCNFYV VAVPTPVDLNNRPDLTPLIGASTTVGKVISKGDIVVYESTVYPGVTEEECLPVVEEVSGLTYNVDFYAGYSPERINPGDK EHTVEKIKKVTSGSTPEIADIVDSVYNSVLVNGTHKAPSIKVAEASKIIENSQRDVNIAFMNELSKIFNAMGIDTNDVIE AASSKWNFIKLKPGLVGGHCISVDPYYLIQKAQVYGVLPRIMSAARRLNDGMGDYVANQVIRLMNKKGILVKDSKILLLG FTFKEDCPDIRNTKVIDIYSTLHEYTSDITVYDAWANSAKVAHEYGISILTAGLDNLVGQFDAVVLCVGHKEFRHMNIRG FLRSDMGVVYDVKAVLSKDIIDGRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-110 | 54 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 4e-110 | 54 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-97 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wcfF | YP_210707.1 | UDP-glucose-6 dehydrogenase | VFG0431 | Protein | 2e-110 | 54 |
